RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C MSN2P33748 704 aa1.38□□□□□ -2.19
VPS55YJR044C ECM15P35195 104 aa1.38□□□□□ -2.19
VPS55YJR044C QDR3P38227 689 aa1.38□□□□□ -2.19
VPS55YJR044C SWC5P38326 303 aa1.38□□□□□ -2.19
VPS55YJR044C MTC4P38335 694 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C MSG5P38590 489 aa1.38□□□□□ -2.19
VPS55YJR044C ALP1P38971 573 aa1.38□□□□□ -2.19
VPS55YJR044C MNN9P39107 395 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C PRP39P39682 629 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C VPS52P39904 641 aa1.38□□□□□ -2.19
VPS55YJR044C ISC1P40015 477 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C GAT2P40209 560 aa1.38□□□□□ -2.19
VPS55YJR044C ATM1P40416 690 aa1.38□□□□□ -2.19
VPS55YJR044C SYG1P40528 902 aa1.38□□□□□ -2.19
VPS55YJR044C NAS2P40555 220 aa1.38□□□□□ -2.19
VPS55YJR044C VMA13P41807 478 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C AIP1P46680 615 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C PHO86P46956 311 aa1.38□□□□□ -2.19
VPS55YJR044C YJR011CP47086 261 aaPredicted RBP1.38□□□□□ -2.19
VPS55YJR044C LIA1P47120 325 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C YJR154WP47181 346 aa1.38□□□□□ -2.19
VPS55YJR044C TIS11P47977 285 aa1.38□□□□□ -2.19
VPS55YJR044C PYK2P52489 506 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C VOA1P53262 265 aa1.38□□□□□ -2.19
VPS55YJR044C ERV25P54837 211 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C MMT1Q03218 510 aa1.38□□□□□ -2.19
VPS55YJR044C YMR010WQ03687 405 aa1.38□□□□□ -2.19
VPS55YJR044C TAP42Q04372 366 aa1.38□□□□□ -2.19
VPS55YJR044C BUR2Q05949 395 aa1.38□□□□□ -2.19
VPS55YJR044C IPK1Q06667 281 aa1.38□□□□□ -2.19
VPS55YJR044C RTT109Q07794 436 aa1.38□□□□□ -2.19
VPS55YJR044C NSE1Q07913 336 aa1.38□□□□□ -2.19
VPS55YJR044C THI20Q08224 551 aa1.38□□□□□ -2.19
VPS55YJR044C AAD15Q08361 143 aa1.38□□□□□ -2.19
VPS55YJR044C LSP1Q12230 341 aaKnown RBP1.38□□□□□ -2.19
VPS55YJR044C YDL012CQ12489 107 aa1.38□□□□□ -2.19
VPS55YJR044C YCL021W-AQ96VH3 125 aa1.38□□□□□ -2.19
VPS55YJR044C ARG4P04076 463 aaPredicted RBP1.37□□□□□ -2.19
VPS55YJR044C TPK3P05986 398 aa1.37□□□□□ -2.19
VPS55YJR044C RAD7P06779 565 aa1.37□□□□□ -2.19
VPS55YJR044C ARF1P11076 181 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C GAL3P13045 520 aa1.37□□□□□ -2.19
VPS55YJR044C CLN3P13365 580 aa1.37□□□□□ -2.19
VPS55YJR044C ARO3P14843 370 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C MTF1P14908 341 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C HXT2P23585 541 aa1.37□□□□□ -2.19
VPS55YJR044C YCR022CP25620 114 aa1.37□□□□□ -2.19
VPS55YJR044C CIN8P27895 1000 aa1.37□□□□□ -2.19
VPS55YJR044C PSO2P30620 661 aa1.37□□□□□ -2.19
VPS55YJR044C SMY1P32364 656 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C ATP11P32453 318 aa1.37□□□□□ -2.19
VPS55YJR044C IME2P32581 645 aa1.37□□□□□ -2.19
VPS55YJR044C UTR4P32626 227 aa1.37□□□□□ -2.19
VPS55YJR044C PTR2P32901 601 aa1.37□□□□□ -2.19
VPS55YJR044C PAD1P33751 242 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
VPS55YJR044C FRE2P36033 711 aa1.37□□□□□ -2.19
VPS55YJR044C RTC2P38279 296 aa1.37□□□□□ -2.19
VPS55YJR044C TCD1P38756 429 aa1.37□□□□□ -2.19
VPS55YJR044C KEL1P38853 1164 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C TDA11P38854 504 aa1.37□□□□□ -2.19
VPS55YJR044C GPI16P38875 610 aa1.37□□□□□ -2.19
VPS55YJR044C STN1P38960 494 aa1.37□□□□□ -2.19
VPS55YJR044C FHL1P39521 936 aa1.37□□□□□ -2.19
VPS55YJR044C SAS2P40963 338 aa1.37□□□□□ -2.19
VPS55YJR044C IDP2P41939 412 aa1.37□□□□□ -2.19
VPS55YJR044C TOM22P49334 152 aa1.37□□□□□ -2.19
VPS55YJR044C PHB2P50085 310 aa1.37□□□□□ -2.19
VPS55YJR044C PNC1P53184 216 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C RTT102P53330 157 aa1.37□□□□□ -2.19
VPS55YJR044C TRM112P53738 135 aaPredicted RBP1.37□□□□□ -2.19
VPS55YJR044C WSC2P53832 503 aa1.37□□□□□ -2.19
VPS55YJR044C SAM50P53969 484 aa1.37□□□□□ -2.19
VPS55YJR044C RHO4Q00246 291 aa1.37□□□□□ -2.19
VPS55YJR044C UTP6Q02354 440 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C IRC15Q02733 499 aa1.37□□□□□ -2.19
VPS55YJR044C STD1Q02794 444 aa1.37□□□□□ -2.19
VPS55YJR044C PNG1Q02890 363 aa1.37□□□□□ -2.19
VPS55YJR044C CWC21Q03375 135 aaKnown RBP1.37□□□□□ -2.19
VPS55YJR044C BET5Q03630 159 aa1.37□□□□□ -2.19
VPS55YJR044C ATC1Q04005 294 aa1.37□□□□□ -2.19
VPS55YJR044C CSI1Q04368 295 aa1.37□□□□□ -2.19
VPS55YJR044C RRN11Q04712 507 aa1.37□□□□□ -2.19
VPS55YJR044C NDL1Q06568 189 aa1.37□□□□□ -2.19
VPS55YJR044C SYO1Q07395 620 aa1.37□□□□□ -2.19
VPS55YJR044C SHS1Q07657 551 aa1.37□□□□□ -2.19
VPS55YJR044C YOL075CQ08234 1294 aa1.37□□□□□ -2.19
VPS55YJR044C SGT1Q08446 395 aa1.37□□□□□ -2.19
VPS55YJR044C YOR365CQ08844 703 aa1.37□□□□□ -2.19
VPS55YJR044C CEX1Q12453 761 aa1.37□□□□□ -2.19
VPS55YJR044C YPR1Q12458 312 aa1.37□□□□□ -2.19
VPS55YJR044C ARP6Q12509 438 aa1.37□□□□□ -2.19
VPS55YJR044C OPI3P05375 206 aa1.36□□□□□ -2.19
VPS55YJR044C ATP1P07251 545 aaKnown RBP1.36□□□□□ -2.19
VPS55YJR044C CHS1P08004 1131 aa1.36□□□□□ -2.19
VPS55YJR044C RPL20AP0CX23 172 aaKnown RBP1.36□□□□□ -2.19
VPS55YJR044C RPL20BP0CX24 172 aaPredicted RBP1.36□□□□□ -2.19
VPS55YJR044C MSS116P15424 664 aaKnown RBP1.36□□□□□ -2.19
VPS55YJR044C SAG1P20840 650 aa1.36□□□□□ -2.19
VPS55YJR044C VPS1P21576 704 aaKnown RBP1.36□□□□□ -2.19
VPS55YJR044C SNT1P25357 1226 aa1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms