RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YDR209CQ03480 137 aa9.44□□□□□ -0.9
UBA4YHR111W PUS7Q08647 676 aaKnown RBP9.44□□□□□ -0.9
UBA4YHR111W BSC1Q12140 328 aa9.44□□□□□ -0.9
UBA4YHR111W MMP1Q12372 583 aa9.44□□□□□ -0.9
UBA4YHR111W PRP46Q12417 451 aaPredicted RBP9.44□□□□□ -0.9
UBA4YHR111W GLT1Q12680 2145 aaKnown RBP9.44□□□□□ -0.9
UBA4YHR111W MCK1P21965 375 aaKnown RBP9.43□□□□□ -0.9
UBA4YHR111W YJL068CP40363 299 aa9.43□□□□□ -0.9
UBA4YHR111W HPM1P40481 377 aa9.43□□□□□ -0.9
UBA4YHR111W RLP7P40693 322 aaKnown RBP9.43□□□□□ -0.9
UBA4YHR111W UBX6P47049 396 aa9.43□□□□□ -0.9
UBA4YHR111W RAD33Q04231 177 aa9.43□□□□□ -0.9
UBA4YHR111W DYN3Q04949 312 aa9.43□□□□□ -0.9
UBA4YHR111W YPR109WQ06104 294 aa9.43□□□□□ -0.9
UBA4YHR111W MCM7P38132 845 aa9.42□□□□□ -0.9
UBA4YHR111W PAC1P39946 494 aaKnown RBP9.42□□□□□ -0.9
UBA4YHR111W LAS21P40367 830 aa9.42□□□□□ -0.9
UBA4YHR111W RNH70P53331 553 aa9.42□□□□□ -0.9
UBA4YHR111W HOL1P53389 586 aa9.42□□□□□ -0.9
UBA4YHR111W ATG21Q02887 496 aa9.42□□□□□ -0.9
UBA4YHR111W YDR476CQ03362 224 aa9.42□□□□□ -0.9
UBA4YHR111W HSP31Q04432 237 aa9.42□□□□□ -0.9
UBA4YHR111W YOR342CQ12182 319 aa9.42□□□□□ -0.9
UBA4YHR111W HTS1P07263 546 aaKnown RBP9.41□□□□□ -0.9
UBA4YHR111W MKK1P32490 508 aa9.41□□□□□ -0.9
UBA4YHR111W ATG14P38270 344 aa9.41□□□□□ -0.9
UBA4YHR111W RCK1P38622 512 aa9.41□□□□□ -0.9
UBA4YHR111W MNN9P39107 395 aaKnown RBP9.41□□□□□ -0.9
UBA4YHR111W QDR2P40474 542 aa9.41□□□□□ -0.9
UBA4YHR111W CIN1P40987 1014 aa9.41□□□□□ -0.9
UBA4YHR111W IRC6P43615 237 aa9.41□□□□□ -0.9
UBA4YHR111W SRP1Q02821 542 aaKnown RBP9.41□□□□□ -0.9
UBA4YHR111W GGA1Q06336 557 aa9.41□□□□□ -0.9
UBA4YHR111W MDM32Q12171 622 aa9.41□□□□□ -0.9
UBA4YHR111W THP2O13539 261 aaKnown RBP9.4□□□□□ -0.9
UBA4YHR111W ZWF1P11412 505 aaKnown RBP9.4□□□□□ -0.9
UBA4YHR111W NUD1P32336 851 aa9.4□□□□□ -0.9
UBA4YHR111W TRM5P38793 499 aa9.4□□□□□ -0.9
UBA4YHR111W DLD3P39976 496 aaKnown RBP9.4□□□□□ -0.9
UBA4YHR111W AAD10P47182 288 aa9.4□□□□□ -0.9
UBA4YHR111W KEL2P50090 882 aa9.4□□□□□ -0.9
UBA4YHR111W SEH1P53011 349 aaKnown RBP9.4□□□□□ -0.9
UBA4YHR111W MPA43P53583 542 aaPredicted RBP9.4□□□□□ -0.9
UBA4YHR111W YLR460CP54007 376 aa9.4□□□□□ -0.9
UBA4YHR111W SKI8Q02793 397 aaPredicted RBP9.4□□□□□ -0.9
UBA4YHR111W PSF1Q12488 208 aa9.4□□□□□ -0.9
UBA4YHR111W YOR032W-AQ8TGS1 66 aa9.4□□□□□ -0.9
UBA4YHR111W NGG1P32494 702 aa9.39□□□□□ -0.91
UBA4YHR111W GDT1P38301 280 aaPredicted RBP9.39□□□□□ -0.91
UBA4YHR111W ATP25Q03153 612 aa9.39□□□□□ -0.91
UBA4YHR111W PUT2P07275 575 aa9.38□□□□□ -0.91
UBA4YHR111W MER1P16523 270 aa9.38□□□□□ -0.91
UBA4YHR111W SAC7P17121 654 aa9.38□□□□□ -0.91
UBA4YHR111W SAN1P22470 610 aa9.38□□□□□ -0.91
UBA4YHR111W CTR86P25355 563 aa9.38□□□□□ -0.91
UBA4YHR111W ATP7P30902 174 aa9.38□□□□□ -0.91
UBA4YHR111W EMP70P32802 667 aa9.38□□□□□ -0.91
UBA4YHR111W TUL1P36096 758 aa9.38□□□□□ -0.91
UBA4YHR111W FAD1P38913 306 aa9.38□□□□□ -0.91
UBA4YHR111W JEM1P40358 645 aa9.38□□□□□ -0.91
UBA4YHR111W YIL067CP40514 678 aa9.38□□□□□ -0.91
UBA4YHR111W SHR5P41912 237 aa9.38□□□□□ -0.91
UBA4YHR111W YGR079WP53249 370 aa9.38□□□□□ -0.91
UBA4YHR111W GTB1Q04924 702 aa9.38□□□□□ -0.91
UBA4YHR111W YDL218WQ07629 317 aa9.38□□□□□ -0.91
UBA4YHR111W MFG1Q07684 458 aa9.38□□□□□ -0.91
UBA4YHR111W YOS9Q99220 542 aa9.38□□□□□ -0.91
UBA4YHR111W HTA1P04911 132 aaKnown RBP9.37□□□□□ -0.91
UBA4YHR111W RPP1BP10622 106 aaKnown RBP9.37□□□□□ -0.91
UBA4YHR111W BAR1P12630 587 aa9.37□□□□□ -0.91
UBA4YHR111W DEP1P31385 405 aa9.37□□□□□ -0.91
UBA4YHR111W YOR062CP36025 268 aa9.37□□□□□ -0.91
UBA4YHR111W ZTA1P38230 334 aaKnown RBP9.37□□□□□ -0.91
UBA4YHR111W TDA11P38854 504 aa9.37□□□□□ -0.91
UBA4YHR111W FAA2P39518 744 aa9.37□□□□□ -0.91
UBA4YHR111W MTW1P39731 289 aa9.37□□□□□ -0.91
UBA4YHR111W BIT61P47041 543 aa9.37□□□□□ -0.91
UBA4YHR111W TMA22P47089 198 aaPredicted RBP9.37□□□□□ -0.91
UBA4YHR111W MIG2P53035 382 aa9.37□□□□□ -0.91
UBA4YHR111W YPL107WQ02873 248 aa9.37□□□□□ -0.91
UBA4YHR111W FDC1Q03034 503 aa9.37□□□□□ -0.91
UBA4YHR111W CGI121Q03705 181 aaKnown RBP9.37□□□□□ -0.91
UBA4YHR111W RAD30Q04049 632 aa9.37□□□□□ -0.91
UBA4YHR111W MUM3Q08750 479 aa9.37□□□□□ -0.91
UBA4YHR111W SNX3Q08826 162 aaKnown RBP9.37□□□□□ -0.91
UBA4YHR111W YIG1Q08956 461 aa9.37□□□□□ -0.91
UBA4YHR111W RPL43AP0CX25 92 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W RPL43BP0CX26 92 aa9.36□□□□□ -0.91
UBA4YHR111W RNA1P11745 407 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W CBS1P14066 229 aa9.36□□□□□ -0.91
UBA4YHR111W CLB3P24870 427 aa9.36□□□□□ -0.91
UBA4YHR111W LHP1P33399 275 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W DHR2P36009 735 aaPredicted RBP9.36□□□□□ -0.91
UBA4YHR111W RPS26AP39938 119 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W RPS26BP39939 119 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W EMC2P47133 292 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W ATG4P53867 494 aa9.36□□□□□ -0.91
UBA4YHR111W YPL068CQ02749 293 aa9.36□□□□□ -0.91
UBA4YHR111W SWP1Q02795 286 aa9.36□□□□□ -0.91
UBA4YHR111W NAT4Q04751 285 aa9.36□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms