RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C ECO1P43605 281 aa12.22□□□□□ -0.45
SHU1YHL006C EMC2P47133 292 aaKnown RBP12.22□□□□□ -0.45
SHU1YHL006C PAC10P48363 199 aa12.22□□□□□ -0.45
SHU1YHL006C RPS12P48589 143 aaKnown RBP12.22□□□□□ -0.45
SHU1YHL006C PBP1P53297 722 aaKnown RBP12.22□□□□□ -0.45
SHU1YHL006C YLR460CP54007 376 aa12.22□□□□□ -0.45
SHU1YHL006C FMN1Q03778 218 aa12.22□□□□□ -0.45
SHU1YHL006C SEI1Q06058 285 aa12.22□□□□□ -0.45
SHU1YHL006C RPN6Q12377 434 aa12.22□□□□□ -0.45
SHU1YHL006C YCL049CP25577 312 aa12.21□□□□□ -0.45
SHU1YHL006C GRE3P38715 327 aaKnown RBP RIP-Chip data12.21□□□□□ -0.45not detected
SHU1YHL006C CCT7P42943 550 aaKnown RBP12.21□□□□□ -0.45
SHU1YHL006C PSF1Q12488 208 aa12.21□□□□□ -0.45
SHU1YHL006C YHR177WP38867 453 aa12.2□□□□□ -0.46
SHU1YHL006C LAS21P40367 830 aa12.2□□□□□ -0.46
SHU1YHL006C SHR5P41912 237 aa12.2□□□□□ -0.46
SHU1YHL006C RNH70P53331 553 aa12.2□□□□□ -0.46
SHU1YHL006C ARC35P53731 342 aaKnown RBP12.2□□□□□ -0.46
SHU1YHL006C TAD3Q9URQ3 322 aa12.2□□□□□ -0.46
SHU1YHL006C BAR1P12630 587 aa12.19□□□□□ -0.46
SHU1YHL006C DAT1P13483 248 aaKnown RBP12.19□□□□□ -0.46
SHU1YHL006C ERP5P38819 212 aa12.19□□□□□ -0.46
SHU1YHL006C PKP1P40530 394 aa12.19□□□□□ -0.46
SHU1YHL006C YOS9Q99220 542 aa12.19□□□□□ -0.46
SHU1YHL006C ARG3P05150 338 aa12.18□□□□□ -0.46
SHU1YHL006C PHO2P07269 559 aa12.18□□□□□ -0.46
SHU1YHL006C MKK1P32490 508 aa12.18□□□□□ -0.46
SHU1YHL006C JEM1P40358 645 aa12.18□□□□□ -0.46
SHU1YHL006C YJL068CP40363 299 aa12.18□□□□□ -0.46
SHU1YHL006C QDR2P40474 542 aa12.18□□□□□ -0.46
SHU1YHL006C YIL067CP40514 678 aa12.18□□□□□ -0.46
SHU1YHL006C RPE1P46969 238 aa12.18□□□□□ -0.46
SHU1YHL006C DIA2Q08496 732 aaPredicted RBP12.18□□□□□ -0.46
SHU1YHL006C TY4B-PA0A0B7P3V8 1104 aa12.17□□□□□ -0.46
SHU1YHL006C ARF1P11076 181 aaKnown RBP12.17□□□□□ -0.46
SHU1YHL006C ERG8P24521 451 aa12.17□□□□□ -0.46
SHU1YHL006C HSP150P32478 413 aa12.17□□□□□ -0.46
SHU1YHL006C NGG1P32494 702 aa12.17□□□□□ -0.46
SHU1YHL006C RFC3P38629 340 aa12.17□□□□□ -0.46
SHU1YHL006C ANS1P38832 159 aa12.17□□□□□ -0.46
SHU1YHL006C HRB1P38922 454 aaKnown RBP RIP-Chip data12.17□□□□□ -0.46not detected
SHU1YHL006C DLD3P39976 496 aaKnown RBP12.17□□□□□ -0.46
SHU1YHL006C RIB2Q12362 591 aaKnown RBP12.17□□□□□ -0.46
SHU1YHL006C SNU114P36048 1008 aaKnown RBP12.16□□□□□ -0.46
SHU1YHL006C FAA2P39518 744 aa12.16□□□□□ -0.46
SHU1YHL006C BPL1P48445 690 aaPredicted RBP12.16□□□□□ -0.46
SHU1YHL006C RPN14P53196 417 aa12.16□□□□□ -0.46
SHU1YHL006C BSC5P53755 489 aa12.16□□□□□ -0.46
SHU1YHL006C PFA5Q03289 374 aa12.16□□□□□ -0.46
SHU1YHL006C INP1Q03694 420 aa12.16□□□□□ -0.46
SHU1YHL006C PAL1Q05518 499 aaKnown RBP12.16□□□□□ -0.46
SHU1YHL006C YLR446WQ06204 433 aa12.16□□□□□ -0.46
SHU1YHL006C COS7Q07788 383 aa12.16□□□□□ -0.46
SHU1YHL006C GPN2Q08726 347 aaPredicted RBP12.16□□□□□ -0.46
SHU1YHL006C HTS1P07263 546 aaKnown RBP12.15□□□□□ -0.46
SHU1YHL006C MEF1P25039 761 aa12.15□□□□□ -0.46
SHU1YHL006C CDC10P25342 322 aaKnown RBP12.15□□□□□ -0.46
SHU1YHL006C ROT2P38138 954 aa12.15□□□□□ -0.46
SHU1YHL006C APE4P38821 490 aa12.15□□□□□ -0.46
SHU1YHL006C IMA5P40884 581 aa12.15□□□□□ -0.46
SHU1YHL006C AAD10P47182 288 aa12.15□□□□□ -0.46
SHU1YHL006C HSV2P50079 448 aaPredicted RBP12.15□□□□□ -0.46
SHU1YHL006C PDR16P53860 351 aaKnown RBP12.15□□□□□ -0.46
SHU1YHL006C YDR476CQ03362 224 aa12.15□□□□□ -0.46
SHU1YHL006C GIS1Q03833 894 aa12.15□□□□□ -0.46
SHU1YHL006C ZWF1P11412 505 aaKnown RBP12.14□□□□□ -0.47
SHU1YHL006C TUL1P36096 758 aa12.14□□□□□ -0.47
SHU1YHL006C ATG14P38270 344 aa12.14□□□□□ -0.47
SHU1YHL006C AST2P39945 430 aaKnown RBP12.14□□□□□ -0.47
SHU1YHL006C PGU1P47180 361 aa12.14□□□□□ -0.47
SHU1YHL006C YGR079WP53249 370 aa12.14□□□□□ -0.47
SHU1YHL006C NCE101Q02820 53 aa12.14□□□□□ -0.47
SHU1YHL006C YLR352WQ06479 807 aa12.14□□□□□ -0.47
SHU1YHL006C WTM2Q12206 467 aa12.14□□□□□ -0.47
SHU1YHL006C GPH1P06738 902 aaKnown RBP12.13□□□□□ -0.47
SHU1YHL006C PBS2P08018 668 aa12.13□□□□□ -0.47
SHU1YHL006C SSA3P09435 649 aaKnown RBP12.13□□□□□ -0.47
SHU1YHL006C KGD1P20967 1014 aaKnown RBP12.13□□□□□ -0.47
SHU1YHL006C BIT61P47041 543 aa12.13□□□□□ -0.47
SHU1YHL006C UBP2Q01476 1272 aa12.13□□□□□ -0.47
SHU1YHL006C YSA1Q01976 231 aa12.13□□□□□ -0.47
SHU1YHL006C SWP1Q02795 286 aa12.13□□□□□ -0.47
SHU1YHL006C MMT1Q03218 510 aa12.13□□□□□ -0.47
SHU1YHL006C MIX14Q04341 121 aa12.13□□□□□ -0.47
SHU1YHL006C SSQ1Q05931 657 aaPredicted RBP12.13□□□□□ -0.47
SHU1YHL006C BAG7Q12128 409 aa12.13□□□□□ -0.47
SHU1YHL006C MDM12Q92328 271 aa12.13□□□□□ -0.47
SHU1YHL006C ATP6P00854 259 aa12.12□□□□□ -0.47
SHU1YHL006C TPK2P06245 380 aa12.12□□□□□ -0.47
SHU1YHL006C CBS1P14066 229 aa12.12□□□□□ -0.47
SHU1YHL006C ERD1P16151 362 aa12.12□□□□□ -0.47
SHU1YHL006C NCP1P16603 691 aaKnown RBP12.12□□□□□ -0.47
SHU1YHL006C CTR86P25355 563 aa12.12□□□□□ -0.47
SHU1YHL006C LHS1P36016 881 aa12.12□□□□□ -0.47
SHU1YHL006C YOR062CP36025 268 aa12.12□□□□□ -0.47
SHU1YHL006C IST2P38250 946 aa12.12□□□□□ -0.47
SHU1YHL006C RCK1P38622 512 aa12.12□□□□□ -0.47
SHU1YHL006C DSS1P39112 969 aa12.12□□□□□ -0.47
SHU1YHL006C SOK1P40317 901 aa12.12□□□□□ -0.47
SHU1YHL006C HPM1P40481 377 aa12.12□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms