RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W PGM1P33401 570 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W MAE1P36013 669 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W THI2P38141 450 aa2□□□□□ -2.09
SIR4YDR227W OSH7P38755 437 aa2□□□□□ -2.09
SIR4YDR227W YJL193WP39542 402 aa2□□□□□ -2.09
SIR4YDR227W YIL077CP40508 320 aa2□□□□□ -2.09
SIR4YDR227W AAD14P42884 376 aa2□□□□□ -2.09
SIR4YDR227W GNP1P48813 663 aa2□□□□□ -2.09
SIR4YDR227W STB4P50104 949 aa2□□□□□ -2.09
SIR4YDR227W VOA1P53262 265 aa2□□□□□ -2.09
SIR4YDR227W TDA7P53882 636 aaPredicted RBP2□□□□□ -2.09
SIR4YDR227W NSG2P53898 299 aa2□□□□□ -2.09
SIR4YDR227W RPS15Q01855 142 aaKnown RBP2□□□□□ -2.09
SIR4YDR227W YPL113CQ02961 396 aa2□□□□□ -2.09
SIR4YDR227W URH1Q04179 340 aa2□□□□□ -2.09
SIR4YDR227W VTS1Q08831 523 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SIR4YDR227W MET32Q12041 191 aa2□□□□□ -2.09
SIR4YDR227W SWT1Q12104 458 aa2□□□□□ -2.09
SIR4YDR227W NCB2Q92317 146 aa2□□□□□ -2.09
SIR4YDR227W ARD1P07347 238 aaPredicted RBP1.99□□□□□ -2.09
SIR4YDR227W TUP1P16649 713 aa1.99□□□□□ -2.09
SIR4YDR227W STE18P18852 110 aa1.99□□□□□ -2.09
SIR4YDR227W SNF6P18888 332 aa1.99□□□□□ -2.09
SIR4YDR227W CPR2P23285 205 aa1.99□□□□□ -2.09
SIR4YDR227W RVS161P25343 265 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W YIH1P25637 258 aa1.99□□□□□ -2.09
SIR4YDR227W GCG1P32656 232 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W YKR078WP36158 585 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W RRP4P38792 359 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W SLZ1P40167 298 aa1.99□□□□□ -2.09
SIR4YDR227W SPG5P42933 373 aa1.99□□□□□ -2.09
SIR4YDR227W SAD1P43589 448 aa1.99□□□□□ -2.09
SIR4YDR227W STB2P46679 850 aa1.99□□□□□ -2.09
SIR4YDR227W YJL132WP47014 750 aa1.99□□□□□ -2.09
SIR4YDR227W YGL204CP53089 101 aa1.99□□□□□ -2.09
SIR4YDR227W PGA2P53903 129 aa1.99□□□□□ -2.09
SIR4YDR227W ERG13P54839 491 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W RPN9Q04062 393 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W IVY1Q04934 453 aa1.99□□□□□ -2.09
SIR4YDR227W RRP45Q05636 305 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W COQ11Q05892 277 aa1.99□□□□□ -2.09
SIR4YDR227W QCR2P07257 368 aa1.99□□□□□ -2.09
SIR4YDR227W PTR2P32901 601 aa1.99□□□□□ -2.09
SIR4YDR227W YIL067CP40514 678 aa1.99□□□□□ -2.09
SIR4YDR227W PYK2P52489 506 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W YGR067CP53243 804 aa1.99□□□□□ -2.09
SIR4YDR227W YNL143CP53908 130 aa1.99□□□□□ -2.09
SIR4YDR227W ENT5Q03769 411 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W DOT1Q04089 582 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W PPR1P07272 904 aaPredicted RBP1.99□□□□□ -2.09
SIR4YDR227W SSA3P09435 649 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W RPL18AP0CX49 186 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W RPL18BP0CX50 186 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W GPI12P23797 304 aa1.99□□□□□ -2.09
SIR4YDR227W ARO4P32449 370 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W REC114P32841 428 aa1.99□□□□□ -2.09
SIR4YDR227W SKT5P34226 696 aa1.99□□□□□ -2.09
SIR4YDR227W MRPL4P36517 319 aa1.99□□□□□ -2.09
SIR4YDR227W FSH1P38777 243 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W RPN3P40016 523 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W HXT9P40885 567 aa1.99□□□□□ -2.09
SIR4YDR227W RPN14P53196 417 aa1.99□□□□□ -2.09
SIR4YDR227W HXT11P54862 567 aa1.99□□□□□ -2.09
SIR4YDR227W EKI1Q03764 534 aa1.99□□□□□ -2.09
SIR4YDR227W RVB1Q03940 463 aaKnown RBP1.99□□□□□ -2.09
SIR4YDR227W YDR109CQ04585 715 aa1.99□□□□□ -2.09
SIR4YDR227W NDL1Q06568 189 aa1.99□□□□□ -2.09
SIR4YDR227W YFT2Q06676 274 aa1.99□□□□□ -2.09
SIR4YDR227W GET4Q12125 312 aa1.99□□□□□ -2.09
SIR4YDR227W GLO4Q12320 285 aa1.99□□□□□ -2.09
SIR4YDR227W PGK1P00560 416 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W HTB1P02293 131 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W HTB2P02294 131 aa1.98□□□□□ -2.09
SIR4YDR227W OPI3P05375 206 aa1.98□□□□□ -2.09
SIR4YDR227W RHO1P06780 209 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W PUT1P09368 476 aa1.98□□□□□ -2.09
SIR4YDR227W YPK1P12688 680 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W FRS1P15624 595 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W NDC1P32500 655 aa1.98□□□□□ -2.09
SIR4YDR227W NRP1P32770 719 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SIR4YDR227W MNN2P38069 597 aa1.98□□□□□ -2.09
SIR4YDR227W RFC4P40339 323 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W ICE2P40499 491 aa1.98□□□□□ -2.09
SIR4YDR227W ASG7P46993 209 aa1.98□□□□□ -2.09
SIR4YDR227W YGR045CP53229 120 aa1.98□□□□□ -2.09
SIR4YDR227W CUS2P53830 285 aaPredicted RBP1.98□□□□□ -2.09
SIR4YDR227W FDC1Q03034 503 aa1.98□□□□□ -2.09
SIR4YDR227W YMR102CQ03177 834 aa1.98□□□□□ -2.09
SIR4YDR227W OST6Q03723 332 aa1.98□□□□□ -2.09
SIR4YDR227W YPR147CQ06522 304 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W CBP2P03874 630 aaPredicted RBP1.98□□□□□ -2.09
SIR4YDR227W SIR1P21691 654 aa1.98□□□□□ -2.09
SIR4YDR227W YCR102CP25608 368 aa1.98□□□□□ -2.09
SIR4YDR227W SAC6P32599 642 aaKnown RBP1.98□□□□□ -2.09
SIR4YDR227W TRM2P33753 639 aa1.98□□□□□ -2.09
SIR4YDR227W UTP11P34247 250 aaPredicted RBP1.98□□□□□ -2.09
SIR4YDR227W CUE1P38428 203 aa1.98□□□□□ -2.09
SIR4YDR227W FAA2P39518 744 aa1.98□□□□□ -2.09
SIR4YDR227W SER3P40054 469 aa1.98□□□□□ -2.09
SIR4YDR227W BST1P43571 1029 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms