RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W NTO1Q12311 748 aa5.32□□□□□ -1.56
SHM1YBR263W HSP42Q12329 375 aa5.32□□□□□ -1.56
SHM1YBR263W BRR2P32639 2163 aaKnown RBP5.32□□□□□ -1.56
SHM1YBR263W ATP4P05626 244 aa5.32□□□□□ -1.56
SHM1YBR263W TPK2P06245 380 aa5.32□□□□□ -1.56
SHM1YBR263W SAN1P22470 610 aa5.32□□□□□ -1.56
SHM1YBR263W MEF1P25039 761 aa5.32□□□□□ -1.56
SHM1YBR263W MGR1P25573 417 aa5.32□□□□□ -1.56
SHM1YBR263W SEC17P32602 292 aa5.32□□□□□ -1.56
SHM1YBR263W CAT2P32796 670 aaKnown RBP5.32□□□□□ -1.56
SHM1YBR263W TAF14P35189 244 aa5.32□□□□□ -1.56
SHM1YBR263W MNN2P38069 597 aa5.32□□□□□ -1.56
SHM1YBR263W ROT2P38138 954 aa5.32□□□□□ -1.56
SHM1YBR263W BNA4P38169 460 aa5.32□□□□□ -1.56
SHM1YBR263W IST2P38250 946 aa5.32□□□□□ -1.56
SHM1YBR263W YIL086CP40503 102 aa5.32□□□□□ -1.56
SHM1YBR263W RPL10P41805 221 aaKnown RBP5.32□□□□□ -1.56
SHM1YBR263W PSA1P41940 361 aaKnown RBP5.32□□□□□ -1.56
SHM1YBR263W UPF3P48412 387 aaKnown RBP5.32□□□□□ -1.56
SHM1YBR263W DIA3P52290 468 aa5.32□□□□□ -1.56
SHM1YBR263W YDR476CQ03362 224 aa5.32□□□□□ -1.56
SHM1YBR263W YMR010WQ03687 405 aa5.32□□□□□ -1.56
SHM1YBR263W DYN3Q04949 312 aa5.32□□□□□ -1.56
SHM1YBR263W YOL073CQ08232 322 aa5.32□□□□□ -1.56
SHM1YBR263W GET4Q12125 312 aa5.32□□□□□ -1.56
SHM1YBR263W NSL1Q12143 216 aa5.32□□□□□ -1.56
SHM1YBR263W PNS1Q12412 539 aa5.32□□□□□ -1.56
SHM1YBR263W SNF8Q12483 233 aa5.32□□□□□ -1.56
SHM1YBR263W SEC39Q12745 709 aa5.32□□□□□ -1.56
SHM1YBR263W ARG3P05150 338 aa5.31□□□□□ -1.56
SHM1YBR263W STE7P06784 515 aa5.31□□□□□ -1.56
SHM1YBR263W COR1P07256 457 aa5.31□□□□□ -1.56
SHM1YBR263W BCY1P07278 416 aaKnown RBP5.31□□□□□ -1.56
SHM1YBR263W MSS116P15424 664 aaKnown RBP5.31□□□□□ -1.56
SHM1YBR263W STE4P18851 423 aa5.31□□□□□ -1.56
SHM1YBR263W VPS33P20795 691 aa5.31□□□□□ -1.56
SHM1YBR263W PWP1P21304 576 aaKnown RBP5.31□□□□□ -1.56
SHM1YBR263W CSM1P25651 190 aa5.31□□□□□ -1.56
SHM1YBR263W ZIP1P31111 875 aa5.31□□□□□ -1.56
SHM1YBR263W SSE1P32589 693 aaKnown RBP5.31□□□□□ -1.56
SHM1YBR263W OAR1P35731 278 aa5.31□□□□□ -1.56
SHM1YBR263W GLG1P36143 616 aa5.31□□□□□ -1.56
SHM1YBR263W RGI1P40043 161 aaPredicted RBP5.31□□□□□ -1.56
SHM1YBR263W YIL001WP40560 513 aa5.31□□□□□ -1.56
SHM1YBR263W PMT4P46971 762 aa5.31□□□□□ -1.56
SHM1YBR263W HOS2P53096 452 aaPredicted RBP5.31□□□□□ -1.56
SHM1YBR263W YGR266WP53326 701 aa5.31□□□□□ -1.56
SHM1YBR263W GOR1P53839 350 aa5.31□□□□□ -1.56
SHM1YBR263W YPL071CQ02864 156 aa5.31□□□□□ -1.56
SHM1YBR263W HSP31Q04432 237 aa5.31□□□□□ -1.56
SHM1YBR263W APC4Q04601 652 aa5.31□□□□□ -1.56
SHM1YBR263W YOR389WQ08912 624 aa5.31□□□□□ -1.56
SHM1YBR263W YPL225WQ08971 146 aaKnown RBP5.31□□□□□ -1.56
SHM1YBR263W MLH3Q12083 715 aa5.31□□□□□ -1.56
SHM1YBR263W NFI1Q12216 726 aa5.31□□□□□ -1.56
SHM1YBR263W RPN6Q12377 434 aa5.31□□□□□ -1.56
SHM1YBR263W ATP2P00830 511 aaKnown RBP5.3□□□□□ -1.56
SHM1YBR263W CBP2P03874 630 aaPredicted RBP5.3□□□□□ -1.56
SHM1YBR263W UNG1P12887 359 aa5.3□□□□□ -1.56
SHM1YBR263W TOP3P13099 656 aa5.3□□□□□ -1.56
SHM1YBR263W SPB1P25582 841 aaPredicted RBP5.3□□□□□ -1.56
SHM1YBR263W TAH1P25638 111 aaPredicted RBP5.3□□□□□ -1.56
SHM1YBR263W YMC1P32331 307 aa5.3□□□□□ -1.56
SHM1YBR263W MRPL15P36523 253 aa5.3□□□□□ -1.56
SHM1YBR263W FZO1P38297 855 aa5.3□□□□□ -1.56
SHM1YBR263W YFL054CP43549 646 aa5.3□□□□□ -1.56
SHM1YBR263W ALR2P43553 858 aa5.3□□□□□ -1.56
SHM1YBR263W HOC1P47124 396 aa5.3□□□□□ -1.56
SHM1YBR263W TRM9P49957 279 aa5.3□□□□□ -1.56
SHM1YBR263W MMT1Q03218 510 aa5.3□□□□□ -1.56
SHM1YBR263W RQC1Q05468 723 aaKnown RBP5.3□□□□□ -1.56
SHM1YBR263W YOL159CQ08300 171 aa5.3□□□□□ -1.56
SHM1YBR263W RIP1P08067 215 aa5.29□□□□□ -1.56
SHM1YBR263W DAP2P18962 818 aa5.29□□□□□ -1.56
SHM1YBR263W RVS161P25343 265 aaKnown RBP5.29□□□□□ -1.56
SHM1YBR263W MXR2P25566 168 aa5.29□□□□□ -1.56
SHM1YBR263W SSH4P32343 579 aa5.29□□□□□ -1.56
SHM1YBR263W CDC12P32468 407 aaKnown RBP5.29□□□□□ -1.56
SHM1YBR263W DOA1P36037 715 aa5.29□□□□□ -1.56
SHM1YBR263W STP2P38704 541 aa5.29□□□□□ -1.56
SHM1YBR263W YIL152WP40455 235 aa5.29□□□□□ -1.56
SHM1YBR263W REC102Q02721 264 aa5.29□□□□□ -1.56
SHM1YBR263W ACL4Q03771 387 aa5.29□□□□□ -1.56
SHM1YBR263W RSM24Q03976 319 aa5.29□□□□□ -1.56
SHM1YBR263W RAD33Q04231 177 aa5.29□□□□□ -1.56
SHM1YBR263W GAD1Q04792 585 aa5.29□□□□□ -1.56
SHM1YBR263W BCP1Q06338 283 aa5.29□□□□□ -1.56
SHM1YBR263W ASA1Q06822 443 aa5.29□□□□□ -1.56
SHM1YBR263W UGA1P17649 471 aa5.28□□□□□ -1.56
SHM1YBR263W ARE1P25628 610 aa5.28□□□□□ -1.56
SHM1YBR263W UGP1P32861 499 aaKnown RBP5.28□□□□□ -1.56
SHM1YBR263W SSO1P32867 290 aa5.28□□□□□ -1.56
SHM1YBR263W RPS27AP35997 82 aaKnown RBP5.28□□□□□ -1.56
SHM1YBR263W UBS1P38290 277 aa5.28□□□□□ -1.56
SHM1YBR263W RPS27BP38711 82 aa5.28□□□□□ -1.56
SHM1YBR263W FAD1P38913 306 aa5.28□□□□□ -1.56
SHM1YBR263W PRP39P39682 629 aaKnown RBP5.28□□□□□ -1.56
SHM1YBR263W AIM2P39721 246 aa5.28□□□□□ -1.56
SHM1YBR263W ALG5P40350 334 aa5.28□□□□□ -1.56
SHM1YBR263W MAM33P40513 266 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms