RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
PHGDH-231ENST00000641939 KIF2CQ99661 725 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 COL6A3P12111 3177 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 EVPLQ92817 2033 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 TMEM265A0A087WTH1 108 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 IGKV6D-21A0A0A0MT36 114 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 GRXCR1A8MXD5 290 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 BACH1O14867 736 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 NBNO60934 754 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 CAND2O75155 1236 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 RBM25P49756 843 aaKnown RBP17.04■□□□□ 0.32
PHGDH-231ENST00000641939 SLC26A2P50443 739 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 GRIK4Q16099 956 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 ZNF746Q6NUN9 644 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-231ENST00000641939 MIS18BP1Q6P0N0 1132 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 PBX4Q9BYU1 374 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 PTPRSQ13332 1948 aa17.04■□□□□ 0.32
PHGDH-231ENST00000641939 MICAL3Q7RTP6 2002 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 CYP3A7-CYP3A51PA0A087WV96 503 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 RRN3P2A6NIE6 340 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 MSH4O15457 936 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 BAIAP3O94812 1187 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 INSRRP14616 1297 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 CYP3A7P24462 503 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 KRT76Q01546 638 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 MBTPS1Q14703 1052 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 PLCB4Q15147 1175 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 Q4G0T1 1027 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 FAM160B1Q5W0V3 765 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 CNKSR3Q6P9H4 555 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 SMAP1Q8IYB5 467 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-231ENST00000641939 TIFAQ96CG3 184 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 FAM161BQ96MY7 647 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 SEMA6BQ9H3T3 888 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 GJB4Q9NTQ9 266 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 TUBE1Q9UJT0 475 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 LOXHD1Q8IVV2 1947 aa17.03■□□□□ 0.32
PHGDH-231ENST00000641939 MBLAC1A4D2B0 266 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-231ENST00000641939 JAK2O60674 1132 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 TDP2O95551 362 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 ATP2A2P16615 1042 aaKnown RBP17.02■□□□□ 0.32
PHGDH-231ENST00000641939 PBX2P40425 430 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 IGBP1P78318 339 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 ST3GAL1Q11201 340 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 RAB30Q15771 203 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 INF2Q27J81 1249 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 MARCH8Q5T0T0 291 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 TAF2Q6P1X5 1199 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 PDXDC2PQ6P474 469 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 MOXD1Q6UVY6 613 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 RUFY4Q6ZNE9 571 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 CCDC60Q8IWA6 550 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-231ENST00000641939 MBOAT7Q96N66 472 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 RIT2Q99578 217 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 TTYH1Q9H313 450 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-231ENST00000641939 ZNF302Q9NR11 478 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 MSRAQ9UJ68 235 aa17.02■□□□□ 0.32
PHGDH-231ENST00000641939 SIP14410 1827 aa17.02■□□□□ 0.31
PHGDH-231ENST00000641939 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 GAS7O60861 476 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 CTSHP09668 335 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 LRCH2Q5VUJ6 765 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 RPAINQ86UA6 219 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 PHOSPHO2Q8TCD6 241 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 OXER1Q8TDS5 423 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 SLC5A5Q92911 643 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 GUCD1Q96NT3 240 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 SLC9A7Q96T83 725 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
PHGDH-231ENST00000641939 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 PCDHA10Q9Y5I2 948 aa17.01■□□□□ 0.31
PHGDH-231ENST00000641939 CHD9Q3L8U1 2897 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 WDR64B1ANS9 1081 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 HBP1O60381 514 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 PSAPP07602 524 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 KRT2P35908 639 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 KCNJ6P48051 423 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 LETM2Q2VYF4 491 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 FAM26DQ5JW98 314 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 NEK8Q86SG6 692 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 RSPH3Q86UC2 560 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 ATP8B4Q8TF62 1192 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
PHGDH-231ENST00000641939 TEKT3Q9BXF9 490 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
PHGDH-231ENST00000641939 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
PHGDH-231ENST00000641939 STXBP5LQ9Y2K9 1186 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 SAMM50Q9Y512 469 aa17■□□□□ 0.31
PHGDH-231ENST00000641939 ABHD14A-ACY1A0A1B0GW23 586 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 EFCAB14O75071 495 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms