RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	IQSEC1	Q6DN90	963 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	GPR20	Q99678	358 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	TUFT1	Q9NNX1	390 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	TCEAL9	Q9UHQ7	104 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	P4HB	P07237	508 aa	Known RBP	19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	PRR29	P0C7W0	189 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	CASP1	P29466	404 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	MDM2	Q00987	491 aa	Predicted RBP	19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	TNFAIP2	Q03169	654 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	CACNB2	Q08289	660 aa	Predicted RBP	19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	MFSD14C	Q5VZR4	134 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	SH3RF1	Q7Z6J0	888 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	RDM1	Q8NG50	284 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	RAET1E	Q8TD07	263 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	SPATA33	Q96N06	139 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	PCYT2	Q99447	389 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	NT5C3A	Q9H0P0	336 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	GNE	Q9Y223	722 aa	Known RBP	19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	TRIM17	Q9Y577	477 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	STK24	Q9Y6E0	443 aa		19.88	■□□□□ 0.77
SPIN3-238	ENST00000640421	SLC26A4	O43511	780 aa		19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	SUPT20HL2	P0C7V6	817 aa		19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	SWSAP1	Q6NVH7	229 aa		19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	NEK9	Q8TD19	979 aa		19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	RAD54L	Q92698	747 aa		19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	PAGE5	Q96GU1	130 aa		19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	PYM1	Q9BRP8	204 aa	Known RBP	19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	TNMD	Q9H2S6	317 aa		19.87	■□□□□ 0.77
SPIN3-238	ENST00000640421	IGKV6D-21	A0A0A0MT36	114 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	ZNF862	O60290	1169 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	GH1	P01241	217 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	AFM	P43652	599 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	QARS	P47897	775 aa	Known RBP	19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	PNOC	Q13519	176 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	MCM6	Q14566	821 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	ZSCAN23	Q3MJ62	389 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	CKAP2L	Q8IYA6	745 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	CEP57L1	Q8IYX8	460 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	PIGO	Q8TEQ8	1089 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	EMID1	Q96A84	441 aa	Predicted RBP	19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	KBTBD4	Q9NVX7	518 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	GABBR1	Q9UBS5	961 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	STK17A	Q9UEE5	414 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	USP25	Q9UHP3	1055 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	PSAP	P07602	524 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	TCF7	P36402	384 aa	Predicted RBP	19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	IRX5	P78411	483 aa	Predicted RBP	19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	MIS18BP1	Q6P0N0	1132 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	RBM43	Q6ZSC3	357 aa	Known RBP	19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	TRMT44	Q8IYL2	757 aa	Known RBP	19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	SEPT1	Q8WYJ6	367 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	LARP4B	Q92615	738 aa	Known RBP	19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	NRBP1	Q9UHY1	535 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	PTCH2	Q9Y6C5	1203 aa		19.86	■□□□□ 0.77
SPIN3-238	ENST00000640421	IGSF9B	Q9UPX0	1349 aa		19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	MYH9	P35579	1960 aa	Known RBP	19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	TMEM150B	A6NC51	233 aa		19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	PRKAR2A	P13861	404 aa	Known RBP	19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	LAMC2	Q13753	1193 aa		19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	DHX8	Q14562	1220 aa	Known RBP	19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	AFG1L	Q8WV93	481 aa		19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	SYAP1	Q96A49	352 aa	Predicted RBP	19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	ZSWIM4	Q9H7M6	989 aa		19.85	■□□□□ 0.77
SPIN3-238	ENST00000640421	NOP56	O00567	594 aa	Known RBP	19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	HMGCR	P04035	888 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	ATP4A	P20648	1035 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	MUT	P22033	750 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	PSMC5	P62195	406 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	ARHGEF6	Q15052	776 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	MAP3K21	Q5TCX8	1036 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	TRIM50	Q86XT4	487 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	PXYLP1	Q8TE99	480 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	CUEDC2	Q9H467	287 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	FAM184B	Q9ULE4	1060 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	BACH1	O14867	736 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	NKRF	O15226	690 aa	Known RBP eCLIP	19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	STBD1	O95210	358 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	CCND3	P30281	292 aa	Predicted RBP	19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	POSTN	Q15063	836 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	TRMT1L	Q7Z2T5	733 aa	Known RBP	19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	ELOA2	Q8IYF1	753 aa	Predicted RBP	19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	OR6J1	Q8NGC5	347 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	PPTC7	Q8NI37	304 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	BLZF1	Q9H2G9	400 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	DNM3	Q9UQ16	869 aa		19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	MAFB	Q9Y5Q3	323 aa	Predicted RBP	19.84	■□□□□ 0.77
SPIN3-238	ENST00000640421	SYCE3	A1L190	88 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	DYNC1LI2	O43237	492 aa	Predicted RBP	19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	LYPLA2	O95372	231 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	PLA2G4B	P0C869	781 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	HSPA8	P11142	646 aa	Known RBP	19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	SLC12A3	P55017	1021 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	PRMT2	P55345	433 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	CUL4B	Q13620	913 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	TLK2	Q86UE8	772 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	C4orf19	Q8IY42	314 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	BHMT2	Q9H2M3	363 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	ZNF302	Q9NR11	478 aa		19.83	■□□□□ 0.76
SPIN3-238	ENST00000640421	LGR5	O75473	907 aa		19.82	■□□□□ 0.76
SPIN3-238	ENST00000640421	AKR1A1	P14550	325 aa		19.82	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms