RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 KIAA0825Q8IV33 1275 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 MYCBPQ99417 103 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 ATP8A1Q9Y2Q0 1164 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 E2F5Q15329 346 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 NXF1Q9UBU9 619 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 GCFC2P16383 781 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 STX19Q8N4C7 294 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 HSPH1Q92598 858 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 PHF21AQ96BD5 680 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 DHTKD1Q96HY7 919 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 SLC4A7Q9Y6M7 1214 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 BTDP43251 543 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 WASHC5Q12768 1159 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 TUBGCP2Q9BSJ2 902 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 CCDC90BQ9GZT6 254 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 SYNDIG1Q9H7V2 258 aa20.45■□□□□ 0.86
CACNA1A-246ENST00000637736 ECEL1O95672 775 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 G2E3Q7L622 706 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 PBKQ96KB5 322 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 CEP70Q8NHQ1 597 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 GPKOWQ92917 476 aaPredicted RBP eCLIP20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 TRPV6Q9H1D0 765 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 IPO5O00410 1097 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 IFT43Q96FT9 208 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 SRPK1Q96SB4 655 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 COPG1Q9Y678 874 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 ZMYM3Q14202 1370 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 LLGL1Q15334 1064 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 USP19O94966 1318 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 TNKSO95271 1327 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 PCYT1AP49585 367 aa20.44■□□□□ 0.86
CACNA1A-246ENST00000637736 ESRRAP11474 423 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 OR9Q1Q8NGQ5 310 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 FOXP1Q9H334 677 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 YIPF2Q9BWQ6 316 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 FSD1LQ9BXM9 530 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 KLC2Q9H0B6 622 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 SHANK2Q9UPX8 1470 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 H0YC42 278 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 KRT4P19013 534 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 CARSP49589 748 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 DOK7Q18PE1 504 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 RRM2BQ7LG56 351 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 HEXIM2Q96MH2 286 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 PPP1R16BQ96T49 567 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 ALCAMQ13740 583 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 ST13P4Q8IZP2 240 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 PRPF4O43172 522 aaKnown RBP eCLIP20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 NEK2P51955 445 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 SEPT2Q15019 361 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 CRLF3Q8IUI8 442 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 SNX5Q9Y5X3 404 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 MOCS3O95396 460 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 ASPSCR1Q9BZE9 553 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 SELENONQ9NZV5 590 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 ABT1Q9ULW3 272 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 XDHP47989 1333 aa20.43■□□□□ 0.86
CACNA1A-246ENST00000637736 OSTNP61366 133 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 TAF1BQ53T94 588 aaPredicted RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 NDUFB9Q9Y6M9 179 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 IQANK1A0A1B0GTG1 560 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 PGRMC1O00264 195 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 EPHB4P54760 987 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 MRPL28Q13084 256 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 SKIV2LQ15477 1246 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 ATP7AQ04656 1500 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 CDO1Q16878 200 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 PLEKHM3Q6ZWE6 761 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 MRFAP1L1Q96HT8 127 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 SARS2Q9NP81 518 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 ARIH2O95376 493 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 SERPINB2P05120 415 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 PYGBP11216 843 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 COPB1P53618 953 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 PSMC1P62191 440 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 ZNF713Q8N859 430 aaPredicted RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 MTBPQ96DY7 904 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 UBXN8O00124 270 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 HIPK4Q8NE63 616 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 RPF1Q9H9Y2 349 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 hCG_1984214I3L0E3 225 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 DSTYKQ6XUX3 929 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 PNMA3Q9UL41 463 aa20.42■□□□□ 0.86
CACNA1A-246ENST00000637736 RASGRF2O14827 1237 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 CDC25BP30305 580 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 AARS2Q5JTZ9 985 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 OTUB1Q96FW1 271 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 PCDHA4Q9UN74 947 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 EXOC1LA0A1B0GW35 172 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 ORC4O43929 436 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 ZNF804BA4D1E1 1349 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 E5RI56 91 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 PFKFB2O60825 505 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 KRT39Q6A163 491 aa20.41■□□□□ 0.86
CACNA1A-246ENST00000637736 SH3KBP1Q96B97 665 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms