RNA–Protein interactions for RNA: ENST00000637301.1

CACNA1D-223, Transcript of calcium voltage-gated channel subunit alpha1 D, human

TSL 5

Gene CACNA1D, Length 216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1D-223	ENST00000637301	LSM1	O15116	133 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	HNRNPR	O43390	633 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	AKR1B10	O60218	316 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ZNF862	O60290	1169 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	MGEA5	O60502	916 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	CTNND1	O60716	968 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	DTNB	O60941	627 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ATP9A	O75110	1047 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SUPT3H	O75486	399 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SURF6	O75683	361 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	BBOX1	O75936	387 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	HEXIM1	O94992	359 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	UPP2	O95045	317 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ZBED1	O96006	694 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	AGT	P01019	485 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	AFP	P02771	609 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PDHA1	P08559	390 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	CDK4	P11802	303 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	IDE	P14735	1019 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	GM2A	P17900	193 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	POLR2E	P19388	210 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	KCNA3	P22001	575 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PTPRE	P23469	700 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	HOXD11	P31277	338 aa	Predicted RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	HAL	P42357	657 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	RTP1	P59025	263 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	MAGOH	P61326	146 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	TUBA4A	P68366	448 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	CTAG1A	P78358	180 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	CREB5	Q02930	508 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	KCNC4	Q03721	635 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	RELA	Q04206	551 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PPID	Q08752	370 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	STK3	Q13188	491 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	DCTN2	Q13561	401 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ITGA7	Q13683	1181 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	R3HDM1	Q15032	1099 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	KRT31	Q15323	416 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	TTF1	Q15361	905 aa	Predicted RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SAFB	Q15424	915 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PTPN21	Q16825	1174 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	INF2	Q27J81	1249 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	P3H1	Q32P28	736 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	MAP7D1	Q3KQU3	841 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	CFAP221	Q4G0U5	840 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PARP10	Q53GL7	1025 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	EPHA10	Q5JZY3	1008 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	FKBP15	Q5T1M5	1219 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	RASIP1	Q5U651	963 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	TRIM68	Q6AZZ1	485 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	MFSD5	Q6N075	450 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SLC2A7	Q6PXP3	512 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	G2E3	Q7L622	706 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PPP1R42	Q7Z4L9	355 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	NANOGNB	Q7Z5D8	188 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ADGRG6	Q86SQ4	1221 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SAPCD2	Q86UD0	394 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SPATA24	Q86W54	205 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	LONP2	Q86WA8	852 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	CCNJL	Q8IV13	435 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	FAM186B	Q8IYM0	893 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PDCD7	Q8N8D1	485 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ARL10	Q8N8L6	244 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ANKLE1	Q8NAG6	615 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	FAM13C	Q8NE31	585 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	NKX2-3	Q8TAU0	364 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PIP4K2C	Q8TBX8	421 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PLEKHO2	Q8TD55	490 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	USP33	Q8TEY7	942 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SCFD2	Q8WU76	684 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SREK1	Q8WXA9	508 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	MAGOHB	Q96A72	148 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	FERMT2	Q96AC1	680 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	VPS50	Q96JG6	964 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	CAPZA3	Q96KX2	299 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	INPP4A	Q96PE3	977 aa	Predicted RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	GSDMA	Q96QA5	445 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	NUDCD1	Q96RS6	583 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ELAC2	Q9BQ52	826 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	TLR10	Q9BXR5	811 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	UNK	Q9C0B0	810 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	LACRT	Q9GZZ8	138 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	GBA3	Q9H227	469 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	DHX36	Q9H2U1	1008 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SH2D4A	Q9H788	454 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SYNC	Q9H7C4	482 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	EPB41L5	Q9HCM4	733 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	IL1RAPL2	Q9NP60	686 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	RBM12	Q9NTZ6	932 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ETNK2	Q9NVF9	386 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	PLK2	Q9NYY3	685 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	BTBD7	Q9P203	1132 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	STX18	Q9P2W9	335 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	DKK3	Q9UBP4	350 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ZNF212	Q9UDV6	495 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	ZRANB1	Q9UGI0	708 aa		4.07	□□□□□ -1.76
CACNA1D-223	ENST00000637301	SEC63	Q9UGP8	760 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms