RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 LMNAP02545 664 aaKnown RBP2.55□□□□□ -2
SCN1A-215ENST00000637285 ITGAVP06756 1048 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 ZNF37AP17032 561 aaPredicted RBP2.55□□□□□ -2
SCN1A-215ENST00000637285 PROZP22891 400 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 LTBRP36941 435 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 TOP3AQ13472 1001 aaPredicted RBP2.55□□□□□ -2
SCN1A-215ENST00000637285 RRP1BQ14684 758 aaKnown RBP2.55□□□□□ -2
SCN1A-215ENST00000637285 GRM7Q14831 915 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 TBR1Q16650 682 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 MBNL2Q5VZF2 373 aaKnown RBP2.55□□□□□ -2
SCN1A-215ENST00000637285 CD276Q5ZPR3 534 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 CYP4F22Q6NT55 531 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 C19orf47Q8N9M1 422 aaKnown RBP2.55□□□□□ -2
SCN1A-215ENST00000637285 KREMEN2Q8NCW0 462 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 NTN5Q8WTR8 489 aaPredicted RBP2.55□□□□□ -2
SCN1A-215ENST00000637285 SCYL1Q96KG9 808 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 MRGPRX3Q96LB0 322 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 KIAA1683Q9H0B3 1180 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 SLC6A20Q9NP91 592 aa2.55□□□□□ -2
SCN1A-215ENST00000637285 KRTAP23-1A1A580 65 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 CYP27B1O15528 508 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 TBX1O43435 398 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 RHOBTB3O94955 611 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 PEX11BO96011 259 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 NAT2P11245 290 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 CDK4P11802 303 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 HOXC12P31275 282 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 RGS19P49795 217 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 KCNQ1P51787 676 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 SLC25A3Q00325 362 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 PCOLCEQ15113 449 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 SF1Q15637 639 aaKnown RBP2.54□□□□□ -2
SCN1A-215ENST00000637285 WDR72Q3MJ13 1102 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 SPTY2D1Q68D10 685 aaPredicted RBP2.54□□□□□ -2
SCN1A-215ENST00000637285 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SCN1A-215ENST00000637285 SYCE2Q6PIF2 218 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 VRK3Q8IV63 474 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 CFHR4Q92496 578 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 SLC39A2Q9NP94 309 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 GINM1Q9NU53 330 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 GPRC5BQ9NZH0 403 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 PCDHGB7Q9Y5F8 929 aa2.54□□□□□ -2
SCN1A-215ENST00000637285 PATL2C9JE40 543 aaKnown RBP2.53□□□□□ -2
SCN1A-215ENST00000637285 HMGCRP04035 888 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 COL6A2P12110 1019 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 ADCY8P40145 1251 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 ETV4P43268 484 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 GIPRP48546 466 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 NFYCQ13952 458 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 CNGB1Q14028 1251 aaPredicted RBP2.53□□□□□ -2
SCN1A-215ENST00000637285 ZNF394Q53GI3 561 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 ZNF362Q5T0B9 420 aaPredicted RBP2.53□□□□□ -2
SCN1A-215ENST00000637285 ACBD5Q5T8D3 534 aaPredicted RBP2.53□□□□□ -2
SCN1A-215ENST00000637285 PAPD7Q5XG87 772 aaKnown RBP2.53□□□□□ -2
SCN1A-215ENST00000637285 DPP8Q6V1X1 898 aaPredicted RBP2.53□□□□□ -2
SCN1A-215ENST00000637285 USP30Q70CQ3 517 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 LARP4Q71RC2 724 aaKnown RBP eCLIP2.53□□□□□ -2
SCN1A-215ENST00000637285 ADGRE4PQ86SQ3 457 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 ADGRG3Q86Y34 549 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 GPR135Q8IZ08 494 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 TMEM87AQ8NBN3 555 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 OR14K1Q8NGZ2 314 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 MICAL1Q8TDZ2 1067 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 NELFAQ9H3P2 528 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 LRP2BPQ9P2M1 347 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 PPARGC1AQ9UBK2 798 aaKnown RBP2.53□□□□□ -2
SCN1A-215ENST00000637285 EFR3BQ9Y2G0 817 aa2.53□□□□□ -2
SCN1A-215ENST00000637285 ZAR1LA6NP61 321 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 CPP00450 1065 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 CD38P28907 300 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 PTGS2P35354 604 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 ZNF76P36508 570 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 SCNN1GP51170 649 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 ZNF143P52747 638 aaPredicted RBP2.52□□□□□ -2.01
SCN1A-215ENST00000637285 COLEC12Q5KU26 742 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 STRIP1Q5VSL9 837 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 DENND5AQ6IQ26 1287 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 FILIP1Q7Z7B0 1213 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 MRGPREQ86SM8 312 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 PRIMA1Q86XR5 153 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 TMEM145Q8NBT3 493 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 OR6P1Q8NGX9 317 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 HAS1Q92839 578 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 BBC3Q96PG8 261 aaPredicted RBP2.52□□□□□ -2.01
SCN1A-215ENST00000637285 KCNJ15Q99712 375 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 CDIP1Q9H305 208 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 CDC42EP3Q9UKI2 254 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 TELO2Q9Y4R8 837 aa2.52□□□□□ -2.01
SCN1A-215ENST00000637285 A0A0A6YYK5 440 aaPredicted RBP2.51□□□□□ -2.01
SCN1A-215ENST00000637285 FAM20BO75063 409 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 SCG5P05408 212 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
SCN1A-215ENST00000637285 COL9A2Q14055 689 aaPredicted RBP2.51□□□□□ -2.01
SCN1A-215ENST00000637285 MRPL58Q14197 206 aaKnown RBP2.51□□□□□ -2.01
SCN1A-215ENST00000637285 TESK1Q15569 626 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 SV2CQ496J9 727 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 Q6ZRM9 215 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 OTOP3Q7RTS5 596 aa2.51□□□□□ -2.01
SCN1A-215ENST00000637285 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.51□□□□□ -2.01
SCN1A-215ENST00000637285 ZNF227Q86WZ6 799 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms