RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 JAKMIP3Q5VZ66 844 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 FBXO46Q6PJ61 603 aaPredicted RBP7.61□□□□□ -1.19
UPF3B-205ENST00000636792 CLEC17AQ6ZS10 378 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 NPLOC4Q8TAT6 608 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 SCFD2Q8WU76 684 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 BAP1Q92560 729 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 FAM20AQ96MK3 541 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 TAAR1Q96RJ0 339 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 RIT2Q99578 217 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 MXRA8Q9BRK3 442 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 RAB34Q9BZG1 259 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 WDR11Q9BZH6 1224 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 JADE2Q9NQC1 790 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 TBC1D22BQ9NU19 505 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 EVA1BQ9NVM1 165 aa7.61□□□□□ -1.19
UPF3B-205ENST00000636792 MYH9P35579 1960 aaKnown RBP7.6□□□□□ -1.19
UPF3B-205ENST00000636792 KIF28PB7ZC32 967 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 ADCY3O60266 1144 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 NEMFO60524 1076 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 PEX10O60683 326 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 BAG4O95429 457 aaKnown RBP7.6□□□□□ -1.19
UPF3B-205ENST00000636792 PGK2P07205 417 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 CYBAP13498 195 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 AKR1A1P14550 325 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 TIMP2P16035 220 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 GRK4P32298 578 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 CLCN1P35523 988 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 ZNF76P36508 570 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 NASPP49321 788 aaPredicted RBP7.6□□□□□ -1.19
UPF3B-205ENST00000636792 NKX3-2P78367 333 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 NEDD9Q14511 834 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 TTLL4Q14679 1199 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 INF2Q27J81 1249 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 IQSEC1Q6DN90 963 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 TMEM151AQ8N4L1 468 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 ZNF511Q8NB15 262 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 RDM1Q8NG50 284 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 RASGRP4Q8TDF6 673 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 KCNG4Q8TDN1 519 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 TRIB2Q92519 343 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 TBC1D5Q92609 795 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 ARHGAP39Q9C0H5 1083 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 SCAND2PQ9GZW5 306 aaPredicted RBP7.6□□□□□ -1.19
UPF3B-205ENST00000636792 KATNBL1Q9H079 304 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 KCNMB3Q9NPA1 279 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 GJB4Q9NTQ9 266 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 DDX25Q9UHL0 483 aaKnown RBP7.6□□□□□ -1.19
UPF3B-205ENST00000636792 PTPN22Q9Y2R2 807 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 TRIM17Q9Y577 477 aa7.6□□□□□ -1.19
UPF3B-205ENST00000636792 ELP1O95163 1332 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 SOBPA7XYQ1 873 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 RNF225M0QZC1 329 aaPredicted RBP7.59□□□□□ -1.19
UPF3B-205ENST00000636792 SEPT4O43236 478 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 CCNT1O60563 726 aaKnown RBP7.59□□□□□ -1.19
UPF3B-205ENST00000636792 PPP6R2O75170 966 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 TAL1P17542 331 aaPredicted RBP7.59□□□□□ -1.19
UPF3B-205ENST00000636792 CYP2B6P20813 491 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 MUTP22033 750 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 SFNP31947 248 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 MRPS9P82933 396 aaKnown RBP7.59□□□□□ -1.19
UPF3B-205ENST00000636792 ATP2C1P98194 919 aaPredicted RBP7.59□□□□□ -1.19
UPF3B-205ENST00000636792 KRT76Q01546 638 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 KCNH2Q12809 1159 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 ACVR2BQ13705 512 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 TMEM266Q2M3C6 531 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 LETM2Q2VYF4 491 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 PLA2G4DQ86XP0 818 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 SMAP1Q8IYB5 467 aaPredicted RBP7.59□□□□□ -1.19
UPF3B-205ENST00000636792 KRI1Q8N9T8 703 aaKnown RBP7.59□□□□□ -1.19
UPF3B-205ENST00000636792 NEK9Q8TD19 979 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 FERMT2Q96AC1 680 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 LENG9Q96B70 501 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 AK8Q96MA6 479 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 SDF4Q9BRK5 362 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 TMEM260Q9NX78 707 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 RTEL1Q9NZ71 1219 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 FAM184BQ9ULE4 1060 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 GABRQQ9UN88 632 aa7.59□□□□□ -1.19
UPF3B-205ENST00000636792 DOCK5Q9H7D0 1870 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 SPATA31C2B4DYI2 1134 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 FAM86B1E9PN63 330 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 IPO5O00410 1097 aaKnown RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 DKC1O60832 514 aaKnown RBP eCLIP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 SNAI1O95863 264 aaPredicted RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 FAM86B2P0C5J1 330 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 OR52Z1P0C646 297 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 MYCLP12524 364 aaPredicted RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 ITGB5P18084 799 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 CST5P28325 142 aaPredicted RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 JAK3P52333 1124 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 LBX1P52954 281 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 PPP2R5CQ13362 524 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 SLC39A14Q15043 492 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 CALCRLQ16602 461 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 SLC9C1Q4G0N8 1177 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 DUSP28Q4G0W2 176 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 PRR16Q569H4 304 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 BRDTQ58F21 947 aaPredicted RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 EARS2Q5JPH6 523 aaKnown RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 ANO1Q5XXA6 986 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms