RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 MYH6P13533 1939 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 TCHHQ07283 1943 aa8.5□□□□□ -1.05
CIITA-214ENST00000636238 B4E1Z4 1266 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 NOP56O00567 594 aaKnown RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 DGKIO75912 1065 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 RGS20O76081 388 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 UPP2O95045 317 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 LGALS2P05162 132 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 STAG3L1P0CL83 205 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 AVPR2P30518 371 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 ADAM17P78536 824 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 ZNF200P98182 395 aaPredicted RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 EXOSC10Q01780 885 aaKnown RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 BTG3Q14201 252 aaPredicted RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 QRICH1Q2TAL8 776 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 RRP12Q5JTH9 1297 aaKnown RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 MCTP2Q6DN12 878 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 CYB5R4Q7L1T6 521 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 DHX32Q7L7V1 743 aaKnown RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 MB21D2Q8IYB1 491 aaPredicted RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 NECAB1Q8N987 351 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 NCOA7Q8NI08 942 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 TNPO1Q92973 898 aaKnown RBP8.49□□□□□ -1.05
CIITA-214ENST00000636238 CHMP4CQ96CF2 233 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 SENP7Q9BQF6 1050 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 RNPEPQ9H4A4 650 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 KAT14Q9H8E8 782 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 TPCN1Q9ULQ1 816 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 PLAGL2Q9UPG8 496 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 LIMCH1Q9UPQ0 1083 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 NEDD4P46934 1319 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 WDFY4Q6ZS81 3184 aa8.49□□□□□ -1.05
CIITA-214ENST00000636238 TECTAO75443 2155 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 ENPP3O14638 875 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 ZBTB5O15062 677 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 TREHO43280 583 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 GALR2O43603 387 aaPredicted RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 PRC1O43663 620 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 CFBP00751 764 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 HMGB1P09429 215 aaKnown RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 PARP1P09874 1014 aaKnown RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 NBL1P41271 181 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 ANTXR2P58335 489 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 FGD1P98174 961 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 DLX2Q07687 328 aaPredicted RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 APOBRQ0VD83 1088 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 STK3Q13188 491 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 HIC1Q14526 733 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 PGM5Q15124 567 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 ME3Q16798 604 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 PTPN21Q16825 1174 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 IER5LQ5T953 404 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 TMEM184AQ6ZMB5 413 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 TSHZ1Q6ZSZ6 1077 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 RALYLQ86SE5 291 aaKnown RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 NPAS4Q8IUM7 802 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 UBALD2Q8IYN6 164 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 SUSD6Q92537 303 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 TBC1D5Q92609 795 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 ATOH1Q92858 354 aaPredicted RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 MTMR8Q96EF0 704 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 ASIC4Q96FT7 647 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 INPP4AQ96PE3 977 aaPredicted RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 JMJD4Q9H9V9 463 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 ALG13Q9NP73 1137 aaKnown RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 CLEC1BQ9P126 229 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 USP15Q9Y4E8 981 aaPredicted RBP8.48□□□□□ -1.05
CIITA-214ENST00000636238 FRMPD4Q14CM0 1322 aa8.48□□□□□ -1.05
CIITA-214ENST00000636238 MBLAC1A4D2B0 266 aaPredicted RBP8.47□□□□□ -1.05
CIITA-214ENST00000636238 SPATA31C2B4DYI2 1134 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 GCOM1H8Y6P7 765 aaPredicted RBP8.47□□□□□ -1.05
CIITA-214ENST00000636238 FIBPO43427 364 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 CTSHP09668 335 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 POLR2MP0CAP2 368 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 GOLGA8HP0CJ92 632 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 HOXB8P17481 243 aaPredicted RBP8.47□□□□□ -1.05
CIITA-214ENST00000636238 MCM5P33992 734 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 TRDNQ13061 729 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 CUL4AQ13619 759 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 CAMK1Q14012 370 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 ANKRD1Q15327 319 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 CCDC83Q8IWF9 413 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 CRIPAKQ8N1N5 446 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 SPPL3Q8TCT6 385 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 RASGRP4Q8TDF6 673 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 ATP8B4Q8TF62 1192 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 BRF1Q92994 677 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 CDHR1Q96JP9 859 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 ZSCAN31Q96LW9 406 aaPredicted RBP8.47□□□□□ -1.05
CIITA-214ENST00000636238 PHOX2BQ99453 314 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 GPR20Q99678 358 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 AAASQ9NRG9 546 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 NAP1L2Q9ULW6 460 aaPredicted RBP8.47□□□□□ -1.05
CIITA-214ENST00000636238 LZTS1Q9Y250 596 aa8.47□□□□□ -1.05
CIITA-214ENST00000636238 RIF1Q5UIP0 2472 aaKnown RBP8.47□□□□□ -1.05
CIITA-214ENST00000636238 PTPRZ1P23471 2315 aaPredicted RBP8.47□□□□□ -1.05
CIITA-214ENST00000636238 GVINP1Q7Z2Y8 2422 aa8.46□□□□□ -1.05
CIITA-214ENST00000636238 PTPRSQ13332 1948 aa8.46□□□□□ -1.05
CIITA-214ENST00000636238 SPTBN4Q9H254 2564 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms