RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 METTL7BQ6UX53 244 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 MFSD6Q6ZSS7 791 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 MIER1Q8N108 512 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 ZKSCAN3Q9BRR0 538 aa21.09■□□□□ 0.97
CLN6-212ENST00000636020 AGO3Q9H9G7 860 aaKnown RBP21.09■□□□□ 0.97
CLN6-212ENST00000636020 DHX16O60231 1041 aaKnown RBP21.08■□□□□ 0.97
CLN6-212ENST00000636020 SP100P23497 879 aaPredicted RBP21.08■□□□□ 0.97
CLN6-212ENST00000636020 HAND2P61296 217 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 ASPRV1Q53RT3 343 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 UTP14CQ5TAP6 766 aaKnown RBP21.08■□□□□ 0.97
CLN6-212ENST00000636020 CYFIP1Q7L576 1253 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 RSPH3Q86UC2 560 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 SAMD3Q8N6K7 520 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 RMDN1Q96DB5 314 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 AMNQ9BXJ7 453 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 TELO2Q9Y4R8 837 aa21.08■□□□□ 0.97
CLN6-212ENST00000636020 NCOR2Q9Y618 2525 aa21.08■□□□□ 0.96
CLN6-212ENST00000636020 STAG3L1P0CL83 205 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 CD52P31358 61 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 TECP42680 631 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 GATMP50440 423 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 CLCN5P51795 746 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 ERVFC1P60507 584 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 NEDD9Q14511 834 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 OTUD7AQ8TE49 926 aaPredicted RBP21.07■□□□□ 0.96
CLN6-212ENST00000636020 HELLSQ9NRZ9 838 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 NR2E1Q9Y466 385 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 CDY2AQ9Y6F7 541 aa21.07■□□□□ 0.96
CLN6-212ENST00000636020 TPRP12270 2363 aaKnown RBP21.06■□□□□ 0.96
CLN6-212ENST00000636020 KRT37O76014 449 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 SEMA3FQ13275 785 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 TBC1D10CQ8IV04 446 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 DNAJB3Q8WWF6 145 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 APOL5Q9BWW9 433 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 FTHL17Q9BXU8 183 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 SMOC2Q9H3U7 446 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 PCDHB12Q9Y5F1 795 aa21.06■□□□□ 0.96
CLN6-212ENST00000636020 ZMYM6O95789 1325 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 SPATA31C2B4DYI2 1134 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 FSCN2O14926 492 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 PPP1R11O60927 126 aaPredicted RBP21.05■□□□□ 0.96
CLN6-212ENST00000636020 SRGAP2BP0DMP2 458 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 MRPS9P82933 396 aaKnown RBP21.05■□□□□ 0.96
CLN6-212ENST00000636020 GNPTABQ3T906 1256 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 PDE12Q6L8Q7 609 aaKnown RBP21.05■□□□□ 0.96
CLN6-212ENST00000636020 DGLUCYQ7Z3D6 616 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 RASGRP4Q8TDF6 673 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 ESR2Q92731 530 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 INPP4AQ96PE3 977 aaPredicted RBP21.05■□□□□ 0.96
CLN6-212ENST00000636020 KAT14Q9H8E8 782 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 TSHZ2Q9NRE2 1034 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 SQORQ9Y6N5 450 aa21.05■□□□□ 0.96
CLN6-212ENST00000636020 C2CD4DB7Z1M9 353 aa21.04■□□□□ 0.96
CLN6-212ENST00000636020 FGF18O76093 207 aa21.04■□□□□ 0.96
CLN6-212ENST00000636020 PARP1P09874 1014 aaKnown RBP21.04■□□□□ 0.96
CLN6-212ENST00000636020 SCG2P13521 617 aa21.04■□□□□ 0.96
CLN6-212ENST00000636020 HOXB8P17481 243 aaPredicted RBP21.04■□□□□ 0.96
CLN6-212ENST00000636020 MRPS6P82932 125 aaKnown RBP21.04■□□□□ 0.96
CLN6-212ENST00000636020 PCDHA1Q9Y5I3 950 aa21.04■□□□□ 0.96
CLN6-212ENST00000636020 DOCK5Q9H7D0 1870 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 MBLAC1A4D2B0 266 aaPredicted RBP21.03■□□□□ 0.96
CLN6-212ENST00000636020 PPFIA1Q13136 1202 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 CCDC178Q5BJE1 867 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 MTMR8Q96EF0 704 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 RNF41Q9H4P4 317 aaPredicted RBP21.03■□□□□ 0.96
CLN6-212ENST00000636020 CDH22Q9UJ99 828 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 TUBE1Q9UJT0 475 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 KMT2BQ9UMN6 2715 aaPredicted RBP21.03■□□□□ 0.96
CLN6-212ENST00000636020 NEDD4P46934 1319 aa21.03■□□□□ 0.96
CLN6-212ENST00000636020 GCOM1H8Y6P7 765 aaPredicted RBP21.02■□□□□ 0.96
CLN6-212ENST00000636020 STAM2O75886 525 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 POLR2MP0CAP2 368 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 HNRNPUQ00839 825 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLN6-212ENST00000636020 GRIK4Q16099 956 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 MARCH8Q5T0T0 291 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 FAM227BQ96M60 508 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 MFSD1Q9H3U5 465 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 AAASQ9NRG9 546 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 TMEM260Q9NX78 707 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 LRFN2Q9ULH4 789 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 PADI3Q9ULW8 664 aa21.02■□□□□ 0.96
CLN6-212ENST00000636020 ZBTB5O15062 677 aa21.01■□□□□ 0.95
CLN6-212ENST00000636020 FIBPO43427 364 aa21.01■□□□□ 0.95
CLN6-212ENST00000636020 SP4Q02446 784 aa21.01■□□□□ 0.95
CLN6-212ENST00000636020 MCMDC2Q4G0Z9 681 aa21.01■□□□□ 0.95
CLN6-212ENST00000636020 SPOUT1Q5T280 376 aaKnown RBP21.01■□□□□ 0.95
CLN6-212ENST00000636020 IQCA1Q86XH1 822 aa21.01■□□□□ 0.95
CLN6-212ENST00000636020 STAG2Q8N3U4 1231 aa21.01■□□□□ 0.95
CLN6-212ENST00000636020 POMKQ9H5K3 350 aa21.01■□□□□ 0.95
CLN6-212ENST00000636020 A0A0D9SFI3 127 aa21■□□□□ 0.95
CLN6-212ENST00000636020 TRIM6-TRIM34B2RNG4 842 aa21■□□□□ 0.95
CLN6-212ENST00000636020 ASGR2P07307 311 aa21■□□□□ 0.95
CLN6-212ENST00000636020 IER5Q5VY09 327 aa21■□□□□ 0.95
CLN6-212ENST00000636020 PLPP4Q5VZY2 271 aa21■□□□□ 0.95
CLN6-212ENST00000636020 CWF19L1Q69YN2 538 aaKnown RBP21■□□□□ 0.95
CLN6-212ENST00000636020 LLGL2Q6P1M3 1020 aa21■□□□□ 0.95
CLN6-212ENST00000636020 SENP7Q9BQF6 1050 aa21■□□□□ 0.95
CLN6-212ENST00000636020 RTEL1Q9NZ71 1219 aa21■□□□□ 0.95
CLN6-212ENST00000636020 FRMPD4Q14CM0 1322 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms