RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SAFBQ15424 915 aaKnown RBP eCLIP18.95■□□□□ 0.62
UBE3D-208ENST00000626828 LETM2Q2VYF4 491 aa18.95■□□□□ 0.62
UBE3D-208ENST00000626828 PPP4R3AQ6IN85 833 aa18.95■□□□□ 0.62
UBE3D-208ENST00000626828 FAM184AQ8NB25 1140 aa18.95■□□□□ 0.62
UBE3D-208ENST00000626828 DHX38Q92620 1227 aaKnown RBP18.95■□□□□ 0.62
UBE3D-208ENST00000626828 SLC5A5Q92911 643 aa18.95■□□□□ 0.62
UBE3D-208ENST00000626828 RNPC3Q96LT9 517 aaKnown RBP18.95■□□□□ 0.62
UBE3D-208ENST00000626828 PCDHA10Q9Y5I2 948 aa18.95■□□□□ 0.62
UBE3D-208ENST00000626828 MYH9P35579 1960 aaKnown RBP18.95■□□□□ 0.62
UBE3D-208ENST00000626828 BTBD18B2RXH4 712 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 TDP2O95551 362 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 PSAPP07602 524 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 CKBP12277 381 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 MARK3P27448 753 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 PPFIA1Q13136 1202 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 NR5A1Q13285 461 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 SWSAP1Q6NVH7 229 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 C8orf76Q96K31 380 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 MTIF3Q9H2K0 278 aaKnown RBP18.94■□□□□ 0.62
UBE3D-208ENST00000626828 ZNF302Q9NR11 478 aa18.94■□□□□ 0.62
UBE3D-208ENST00000626828 DDX25Q9UHL0 483 aaKnown RBP18.94■□□□□ 0.62
UBE3D-208ENST00000626828 GAS7O60861 476 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 INSRRP14616 1297 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 PLCB4Q15147 1175 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 TRIM71Q2Q1W2 868 aaKnown RBP18.93■□□□□ 0.62
UBE3D-208ENST00000626828 LRCH2Q5VUJ6 765 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 GPR153Q6NV75 609 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 LRRC8DQ7L1W4 858 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 DEFB128Q7Z7B8 93 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 DIS3L2Q8IYB7 885 aaKnown RBP18.93■□□□□ 0.62
UBE3D-208ENST00000626828 LMBR1Q8WVP7 490 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 HERVK_113Q902F9 699 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 TNFRSF25Q93038 417 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 TMX3Q96JJ7 454 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 TEKT3Q9BXF9 490 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 SAMM50Q9Y512 469 aa18.93■□□□□ 0.62
UBE3D-208ENST00000626828 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-208ENST00000626828 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-208ENST00000626828 POTEB3A0JP26 581 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 WDR64B1ANS9 1081 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 SOX1O00570 391 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-208ENST00000626828 CCNT1O60563 726 aaKnown RBP18.92■□□□□ 0.62
UBE3D-208ENST00000626828 CAND2O75155 1236 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 SFNP31947 248 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 THPOP40225 353 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 FOSBP53539 338 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 GRIK4Q16099 956 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 ZNF618Q5T7W0 954 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 RASIP1Q5U651 963 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 PDXDC2PQ6P474 469 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 POTEBQ6S5H4 581 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 FBXO18Q8NFZ0 1043 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 FAM20AQ96MK3 541 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 FTOQ9C0B1 505 aaKnown RBP eCLIP18.92■□□□□ 0.62
UBE3D-208ENST00000626828 DISC1Q9NRI5 854 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 TRPC6Q9Y210 931 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 KIF3AQ9Y496 699 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 MAFBQ9Y5Q3 323 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-208ENST00000626828 TET1Q8NFU7 2136 aa18.92■□□□□ 0.62
UBE3D-208ENST00000626828 RSPH10B2B2RC85 870 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 MARCH6O60337 910 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 HBP1O60381 514 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 PSMD10O75832 226 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 RSPH10BP0C881 870 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 ACTN1P12814 892 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 JAK3P52333 1124 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 EARS2Q5JPH6 523 aaKnown RBP18.91■□□□□ 0.62
UBE3D-208ENST00000626828 TAF2Q6P1X5 1199 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 OTOP2Q7RTS6 562 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 CCDC60Q8IWA6 550 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-208ENST00000626828 RDM1Q8NG50 284 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 WNT8BQ93098 351 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 VWCEQ96DN2 955 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 LRCH3Q96II8 777 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 SCN5AQ14524 2016 aa18.91■□□□□ 0.62
UBE3D-208ENST00000626828 MBLAC1A4D2B0 266 aaPredicted RBP18.9■□□□□ 0.62
UBE3D-208ENST00000626828 TBX3O15119 743 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 BAG4O95429 457 aaKnown RBP18.9■□□□□ 0.62
UBE3D-208ENST00000626828 RPLP2P05387 115 aaKnown RBP18.9■□□□□ 0.62
UBE3D-208ENST00000626828 SMAD3P84022 425 aaKnown RBP18.9■□□□□ 0.62
UBE3D-208ENST00000626828 GUCY1B3Q02153 619 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 MARCH8Q5T0T0 291 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 RPAINQ86UA6 219 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 RSPH3Q86UC2 560 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 CKAP2LQ8IYA6 745 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 ETNPPLQ8TBG4 499 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 ATP8B4Q8TF62 1192 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 GABBR1Q9UBS5 961 aa18.9■□□□□ 0.62
UBE3D-208ENST00000626828 CD2BP2O95400 341 aaKnown RBP18.89■□□□□ 0.61
UBE3D-208ENST00000626828 IGBP1P78318 339 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 GPNMBQ14956 572 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 ZNF484Q5JVG2 852 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 MIER3Q7Z3K6 550 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 BBXQ8WY36 941 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-208ENST00000626828 GJA10Q969M2 543 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 FOXP1Q9H334 677 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-208ENST00000626828 UNC45AQ9H3U1 944 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 KCNMB3Q9NPA1 279 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 NRBP2Q9NSY0 501 aa18.89■□□□□ 0.61
UBE3D-208ENST00000626828 TUBE1Q9UJT0 475 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms