RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SPDYE3A6NKU9 549 aa22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 MMP1P03956 469 aa22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 IGFBP4P22692 258 aa22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 GNA11P29992 359 aa22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 WDR5P61964 334 aaKnown RBP22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 TRIM50Q86XT4 487 aa22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 GIMAP8Q8ND71 665 aaPredicted RBP22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 ATP6V0A1Q93050 837 aa22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 ZNF215Q9UL58 517 aaPredicted RBP22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 NLRC5Q86WI3 1866 aa22.67■■□□□ 1.22
R3HCC1-210ENST00000625275 KIF28PB7ZC32 967 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 SP4Q02446 784 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 MBTPS1Q14703 1052 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 LARP1BQ659C4 914 aaKnown RBP22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 PPM1EQ8WY54 764 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 CDHR1Q96JP9 859 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 GLT8D2Q9H1C3 349 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 PCDHA4Q9UN74 947 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 MYH9P35579 1960 aaKnown RBP22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 EMSYQ7Z589 1322 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 GALNT17Q6IS24 598 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 TEX2Q8IWB9 1127 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 REXO1Q8N1G1 1221 aaKnown RBP22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 DAGLBQ8NCG7 672 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 RNPEPQ9H4A4 650 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 TELO2Q9Y4R8 837 aa22.66■■□□□ 1.22
R3HCC1-210ENST00000625275 BRWD1Q9NSI6 2320 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 ABHD14A-ACY1A0A1B0GW23 586 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 KCNA2P16389 499 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 ITGB5P18084 799 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 PDCP20941 246 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 THPOP40225 353 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 CLK2P49760 499 aaKnown RBP22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 TCTN1Q2MV58 587 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 UTP14CQ5TAP6 766 aaKnown RBP22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 BLIDQ8IZY5 108 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 BICD2Q8TD16 824 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 RASGRP4Q8TDF6 673 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 EHMT1Q9H9B1 1298 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 TMEM260Q9NX78 707 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 PCDHA6Q9UN73 950 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 PCDHA8Q9Y5H6 950 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 UBIAD1Q9Y5Z9 338 aa22.65■■□□□ 1.22
R3HCC1-210ENST00000625275 M0R2N6 131 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 TREHO43280 583 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 TLL1O43897 1013 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 EFCAB14O75071 495 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 SYT1P21579 422 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 DEFB103AP81534 67 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 MTMR1Q13613 665 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 OXER1Q8TDS5 423 aa22.64■■□□□ 1.21
R3HCC1-210ENST00000625275 RSPH10B2B2RC85 870 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 ATP9AO75110 1047 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 LGR5O75473 907 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 RSPH10BP0C881 870 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 GNAT1P11488 350 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 TAP1Q03518 808 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 IKBKEQ14164 716 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 DIS3L2Q8IYB7 885 aaKnown RBP22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 PRDM6Q9NQX0 595 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 SETD4Q9NVD3 440 aa22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 DAXXQ9UER7 740 aaPredicted RBP22.63■■□□□ 1.21
R3HCC1-210ENST00000625275 H3BQV1 296 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 CAND2O75155 1236 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 ARHGEF15O94989 841 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 KRT2P35908 639 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 TCF7P36402 384 aaPredicted RBP22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 CCDC85BQ15834 202 aaPredicted RBP22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 JAKMIP3Q5VZ66 844 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 TMCO2Q7Z6W1 182 aaPredicted RBP22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 CERS4Q9HA82 394 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 JADE2Q9NQC1 790 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 VCANP13611 3396 aa22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 TCF20Q9UGU0 1960 aaKnown RBP22.62■■□□□ 1.21
R3HCC1-210ENST00000625275 BTBD18B2RXH4 712 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 NR5A1Q13285 461 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 AP3B2Q13367 1082 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 SAFBQ15424 915 aaKnown RBP eCLIP22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 LMBR1Q8WVP7 490 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 PGBD1Q96JS3 809 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 ZBED2Q9BTP6 218 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 BRMS1Q9HCU9 246 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 PKD2L1Q9P0L9 805 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 THEGQ9P2T0 379 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 RALGAPA2Q2PPJ7 1873 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 EVPLQ92817 2033 aa22.61■■□□□ 1.21
R3HCC1-210ENST00000625275 VPS37CA5D8V6 355 aaPredicted RBP22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 MAFGO15525 162 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 TNFRSF25Q93038 417 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 EPOPA6NHQ4 379 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 STX6O43752 255 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 GJB5O95377 273 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 CTSHP09668 335 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 ADAM17P78536 824 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 ARHGAP4P98171 946 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 TJAP1Q5JTD0 557 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 DBF4BQ8NFT6 615 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 ARNTL2Q8WYA1 636 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 SEPT1Q8WYJ6 367 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 SYMPKQ92797 1274 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms