RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 NUB1Q9Y5A7 615 aa4.88□□□□□ -1.63
TARDBP-220ENST00000618606 U2SURPO15042 1029 aaKnown RBP4.87□□□□□ -1.63
TARDBP-220ENST00000618606 NKRFO15226 690 aaKnown RBP eCLIP4.87□□□□□ -1.63
TARDBP-220ENST00000618606 RAD17O75943 681 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 LTFP02788 710 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 FGFR1P11362 822 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 COL6A2P12110 1019 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 ACO1P21399 889 aaKnown RBP4.87□□□□□ -1.63
TARDBP-220ENST00000618606 ARID5AQ03989 594 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 SPIRE1Q08AE8 756 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 NTRK3Q16288 839 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 SKIDA1Q1XH10 827 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 KCNT2Q6UVM3 1135 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 MCF2L2Q86YR7 1114 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 C1orf210Q8IVY1 113 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 REXO1L1PQ8IX06 675 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 CELF2-AS1Q8N7Q2 184 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 CACTINQ8WUQ7 758 aaKnown RBP4.87□□□□□ -1.63
TARDBP-220ENST00000618606 OSBP2Q969R2 916 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 ZG16BQ96DA0 208 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 CRAMP1Q96RY5 1269 aa4.87□□□□□ -1.63
TARDBP-220ENST00000618606 ACOT7O00154 380 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 KLF4O43474 513 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 FBXO21O94952 628 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 IL18BPO95998 194 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 C1SP09871 688 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 GRK2P25098 689 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 GRK3P35626 688 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 GPR85P60893 370 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 KIZQ2M2Z5 673 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 CD276Q5ZPR3 534 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 GPR155Q7Z3F1 870 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 IFNL3Q8IZI9 196 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 STPG3Q8N7X2 389 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 TINF2Q9BSI4 451 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 AARSD1Q9BTE6 412 aaKnown RBP4.86□□□□□ -1.63
TARDBP-220ENST00000618606 ARHGEF4Q9NR80 690 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 ST7Q9NRC1 585 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 ARHGAP20Q9P2F6 1191 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 ZFP69BQ9UJL9 534 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 DSEQ9UL01 958 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 SLC30A1Q9Y6M5 507 aa4.86□□□□□ -1.63
TARDBP-220ENST00000618606 IQCA1LA6NCM1 817 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 ZNF839A8K0R7 811 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 PRODHO43272 600 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 GNAT1P11488 350 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 PABPC1P11940 636 aaKnown RBP4.85□□□□□ -1.63
TARDBP-220ENST00000618606 GLRBP48167 497 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 RAC3P60763 192 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 DDR2Q16832 855 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 FNDC7Q5VTL7 733 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 STYK1Q6J9G0 422 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 MAMDC4Q6UXC1 1216 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 POLNQ7Z5Q5 900 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.85□□□□□ -1.63
TARDBP-220ENST00000618606 IL17DQ8TAD2 202 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 HNRNPLLQ8WVV9 542 aaKnown RBP4.85□□□□□ -1.63
TARDBP-220ENST00000618606 VOPP1Q96AW1 172 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 PLEKHG4BQ96PX9 1271 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 GMLQ99445 158 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 KCNJ15Q99712 375 aa4.85□□□□□ -1.63
TARDBP-220ENST00000618606 R3HCC1Q9Y3T6 440 aaKnown RBP4.85□□□□□ -1.63
TARDBP-220ENST00000618606 SOD2P04179 222 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 ADH4P08319 380 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 ACRV1P26436 265 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 TUBA3CQ13748 450 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 USP10Q14694 798 aaKnown RBP4.84□□□□□ -1.63
TARDBP-220ENST00000618606 ZNF568Q3ZCX4 644 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 DPY19L2P1Q6NXN4 242 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 TUBA3EQ6PEY2 450 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 PCSK4Q6UW60 755 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 NSMFQ6X4W1 530 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 ANKS3Q6ZW76 656 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 KCTD1Q719H9 257 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 MRGPRGQ86SM5 289 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 SLC43A3Q8NBI5 491 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 ST13P5Q8NFI4 369 aaPredicted RBP4.84□□□□□ -1.63
TARDBP-220ENST00000618606 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.84□□□□□ -1.63
TARDBP-220ENST00000618606 SH3RF2Q8TEC5 729 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 LARP4BQ92615 738 aaKnown RBP4.84□□□□□ -1.63
TARDBP-220ENST00000618606 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 AGAP2Q99490 1192 aa4.84□□□□□ -1.63
TARDBP-220ENST00000618606 TCRBV5S4A2TA0A5A2 114 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 FAM47E-STBD1D6RA91 191 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 H0Y858 1186 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 TCF3P15923 654 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 CR2P20023 1033 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 MMRN2Q9H8L6 949 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 IPPKQ9H8X2 491 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 OAZ3Q9UMX2 235 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 DMRT1Q9Y5R6 373 aa4.83□□□□□ -1.64
TARDBP-220ENST00000618606 ASXL2Q76L83 1435 aa4.82□□□□□ -1.64
TARDBP-220ENST00000618606 BLACEA4D250 179 aa4.82□□□□□ -1.64
TARDBP-220ENST00000618606 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
TARDBP-220ENST00000618606 MAKP20794 623 aa4.82□□□□□ -1.64
TARDBP-220ENST00000618606 POLD1P28340 1107 aa4.82□□□□□ -1.64
TARDBP-220ENST00000618606 DBPQ10586 325 aaPredicted RBP4.82□□□□□ -1.64
TARDBP-220ENST00000618606 LRCH2Q5VUJ6 765 aa4.82□□□□□ -1.64
TARDBP-220ENST00000618606 DPH6Q7L8W6 267 aa4.82□□□□□ -1.64
TARDBP-220ENST00000618606 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms