RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 HOXC6P09630 235 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 ZSCAN20P17040 1043 aaPredicted RBP18.19■□□□□ 0.5
SNAP47-213ENST00000617596 FLT3LGP49771 235 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 KRT76Q01546 638 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 CUL4BQ13620 913 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 UGCGQ16739 394 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 HYIQ5T013 277 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 CCDC62Q6P9F0 684 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 SH3RF1Q7Z6J0 888 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 PIGOQ8TEQ8 1089 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 APBA2Q99767 749 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 LXNQ9BS40 222 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 CFHR5Q9BXR6 569 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 PCDHA5Q9Y5H7 936 aa18.19■□□□□ 0.5
SNAP47-213ENST00000617596 NFASCO94856 1347 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 KDM3AQ9Y4C1 1321 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 LOC102724159A0A0B4J2E5 919 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 GPR25O00155 361 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 CTAGE5O15320 804 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 LETM1O95202 739 aaPredicted RBP18.18■□□□□ 0.5
SNAP47-213ENST00000617596 ACTR2P61160 394 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 PWP2Q15269 919 aaKnown RBP18.18■□□□□ 0.5
SNAP47-213ENST00000617596 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
SNAP47-213ENST00000617596 RAD54LQ92698 747 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 SENP7Q9BQF6 1050 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 PYM1Q9BRP8 204 aaKnown RBP18.18■□□□□ 0.5
SNAP47-213ENST00000617596 POLR3CQ9BUI4 534 aaPredicted RBP18.18■□□□□ 0.5
SNAP47-213ENST00000617596 KIAA1468Q9P260 1216 aa18.18■□□□□ 0.5
SNAP47-213ENST00000617596 WDR64B1ANS9 1081 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 SSBP05455 408 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNAP47-213ENST00000617596 TGFB3P10600 412 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 ACVR2BQ13705 512 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 UVSSAQ2YD98 709 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 ZNF746Q6NUN9 644 aaPredicted RBP18.17■□□□□ 0.5
SNAP47-213ENST00000617596 SCFD2Q8WU76 684 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 NT5C3AQ9H0P0 336 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 MLXIPQ9HAP2 919 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 VTA1Q9NP79 307 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 USP25Q9UHP3 1055 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 ZNF236Q9UL36 1845 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 SYNGAP1Q96PV0 1343 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 NEDD9Q14511 834 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 TTLL4Q14679 1199 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 KIF22Q14807 665 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 SH2D3AQ9BRG2 576 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 KBTBD4Q9NVX7 518 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 PCDHA10Q9Y5I2 948 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 BRCA2P51587 3418 aa18.17■□□□□ 0.5
SNAP47-213ENST00000617596 TMEM150BA6NC51 233 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 ADCY6O43306 1168 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 JAK3P52333 1124 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 HSDL1Q3SXM5 330 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 CELF3Q5SZQ8 465 aaKnown RBP18.16■□□□□ 0.5
SNAP47-213ENST00000617596 TAF3Q5VWG9 929 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 SWSAP1Q6NVH7 229 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 ABHD16BQ9H3Z7 469 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 TUFT1Q9NNX1 390 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 GABBR1Q9UBS5 961 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
SNAP47-213ENST00000617596 P4HBP07237 508 aaKnown RBP18.15■□□□□ 0.5
SNAP47-213ENST00000617596 PLA2G4BP0C869 781 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 SFNP31947 248 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 DPYDQ12882 1025 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 CCDC144BQ3MJ40 725 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 METTL7BQ6UX53 244 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 ABHD15Q6UXT9 468 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 SV2BQ7L1I2 683 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 CCDC60Q8IWA6 550 aaPredicted RBP18.15■□□□□ 0.5
SNAP47-213ENST00000617596 DHX37Q8IY37 1157 aaKnown RBP18.15■□□□□ 0.5
SNAP47-213ENST00000617596 ZNF296Q8WUU4 475 aaPredicted RBP18.15■□□□□ 0.5
SNAP47-213ENST00000617596 FUCA2Q9BTY2 467 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 BHMT2Q9H2M3 363 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 DNM3Q9UQ16 869 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 SMPD1P17405 629 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 RAD51AP2Q09MP3 1159 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 KCNV1Q6PIU1 500 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 DYMQ7RTS9 669 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 TRIB2Q92519 343 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 LENG1Q96BZ8 264 aaPredicted RBP18.15■□□□□ 0.5
SNAP47-213ENST00000617596 SPATA33Q96N06 139 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 CUEDC2Q9H467 287 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 HOOK1Q9UJC3 728 aaKnown RBP18.15■□□□□ 0.5
SNAP47-213ENST00000617596 STK24Q9Y6E0 443 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 THSD7BQ9C0I4 1608 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 MGAMO43451 1857 aa18.15■□□□□ 0.5
SNAP47-213ENST00000617596 NPHP3-ACAD11A0A0J9YXS1 232 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 GSTTP1A0A1W2PQM5 241 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 MYMKA6NI61 221 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
SNAP47-213ENST00000617596 TYRO3Q06418 890 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 TRIM32Q13049 653 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 OLFML2BQ68BL8 750 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 ELOA2Q8IYF1 753 aaPredicted RBP18.14■□□□□ 0.49
SNAP47-213ENST00000617596 MSL3Q8N5Y2 521 aaKnown RBP18.14■□□□□ 0.49
SNAP47-213ENST00000617596 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
SNAP47-213ENST00000617596 SMARCE1Q969G3 411 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 POLD4Q9HCU8 107 aa18.14■□□□□ 0.49
SNAP47-213ENST00000617596 RBM47A0AV96 593 aaKnown RBP18.13■□□□□ 0.49
SNAP47-213ENST00000617596 BACH1O14867 736 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms