RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 GIMAP8Q8ND71 665 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 NTN5Q8WTR8 489 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 IER2Q9BTL4 223 aa3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 HIRIP3Q9BW71 556 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 TANGO6Q9C0B7 1094 aa3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 ST7Q9NRC1 585 aa3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 GPR27Q9NS67 375 aa3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 BTG4Q9NY30 223 aa3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 FTSJ1Q9UET6 329 aa3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 TMEFF2Q9UIK5 374 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 MSRB2Q9Y3D2 182 aa3.99□□□□□ -1.77
HMGB1P24-202ENST00000615653 PROB1E7EW31 1015 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 MAFKO60675 156 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 EIF5BO60841 1220 aaKnown RBP3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 ACO1P21399 889 aaKnown RBP3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 C21orf58P58505 322 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 RASGRF1Q13972 1273 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 COLEC12Q5KU26 742 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 CEP68Q76N32 757 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 RCBTB1Q8NDN9 531 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 PHOSPHO1Q8TCT1 267 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 ZFYVE21Q9BQ24 234 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 EPB41L1Q9H4G0 881 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 ARHGEF4Q9NR80 690 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 SIRPGQ9P1W8 387 aa3.98□□□□□ -1.77
HMGB1P24-202ENST00000615653 TRAV20A0A0B4J274 112 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 HGSO14964 777 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 DGKIO75912 1065 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 STAT5AP42229 794 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 NKX3-2P78367 333 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 SF1Q15637 639 aaKnown RBP3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 MAMDC4Q6UXC1 1216 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 FUKQ8N0W3 1084 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 DCAF4Q8WV16 495 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 CLIC6Q96NY7 704 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 TTPALQ9BTX7 342 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 CCDC113Q9H0I3 377 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 SLC2A4RGQ9NR83 387 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 CLDND1Q9NY35 253 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 PTGFRNQ9P2B2 879 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 NUB1Q9Y5A7 615 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 PCDHB4Q9Y5E5 795 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 PCDHA2Q9Y5H9 948 aa3.97□□□□□ -1.77
HMGB1P24-202ENST00000615653 MASP2O00187 686 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 ARNTLO00327 626 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 KRIT1O00522 736 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 PDPK1O15530 556 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 DLX3O60479 287 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 PABPC1P11940 636 aaKnown RBP3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 ACRV1P26436 265 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 SF3A1Q15459 793 aaKnown RBP3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 KIZQ2M2Z5 673 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 EPHA10Q5JZY3 1008 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 STEAP3Q658P3 488 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 DENND5AQ6IQ26 1287 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 USP53Q70EK8 1073 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 LRP10Q7Z4F1 713 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 MILR1Q7Z6M3 343 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 TAX1BP1Q86VP1 789 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 CLIP3Q96DZ5 547 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 CHAMP1Q96JM3 812 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 ZSWIM3Q96MP5 696 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 LRRC37BQ96QE4 947 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 WRNIP1Q96S55 665 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 YIPF4Q9BSR8 244 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 PHF20Q9BVI0 1012 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 ZNF703Q9H7S9 590 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 ADARB2Q9NS39 739 aaKnown RBP3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 FBXL7Q9UJT9 491 aa3.96□□□□□ -1.78
HMGB1P24-202ENST00000615653 PRODHO43272 600 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 TADA3O75528 432 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 RAD17O75943 681 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 LCP1P13796 627 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 NAT1P18440 290 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 GRIA2P42262 883 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 GPR85P60893 370 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 IFRD2Q12894 506 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 MTERF2Q49AM1 385 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 ZC3H12BQ5HYM0 836 aaKnown RBP3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 ZNF362Q5T0B9 420 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 SOGA3Q5TF21 947 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 STYK1Q6J9G0 422 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 NSMFQ6X4W1 530 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 MAMDC2Q7Z304 686 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 RALYLQ86SE5 291 aaKnown RBP3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 TRIM48Q8IWZ4 208 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 TTLL11Q8NHH1 800 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 SPATA9Q9BWV2 254 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 SMOC1Q9H4F8 434 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 DTLQ9NZJ0 730 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 PPP1R1BQ9UD71 204 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 CROTQ9UKG9 612 aa3.95□□□□□ -1.78
HMGB1P24-202ENST00000615653 A0A0A6YYK5 440 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 TCRBV5S2A0A599 114 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 GRK2P25098 689 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 GRK3P35626 688 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms