RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 IPO5O00410 1097 aaKnown RBP21.17■□□□□ 0.98
MMP28-204ENST00000615136 FAM114A1Q8IWE2 563 aa21.17■□□□□ 0.98
MMP28-204ENST00000615136 PRDM10Q9NQV6 1147 aa21.17■□□□□ 0.98
MMP28-204ENST00000615136 KCNH7Q9NS40 1196 aa21.17■□□□□ 0.98
MMP28-204ENST00000615136 ARGLU1Q9NWB6 273 aaPredicted RBP21.17■□□□□ 0.98
MMP28-204ENST00000615136 CAPN11Q9UMQ6 739 aa21.17■□□□□ 0.98
MMP28-204ENST00000615136 RABGAP1Q9Y3P9 1069 aa21.17■□□□□ 0.98
MMP28-204ENST00000615136 EYA4O95677 639 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 EIF2AK2P19525 551 aaKnown RBP21.16■□□□□ 0.98
MMP28-204ENST00000615136 TBC1D8BQ0IIM8 1120 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 SFR1Q86XK3 245 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 OR8K1Q8NGG5 319 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 TRERF1Q96PN7 1200 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 AS3MTQ9HBK9 375 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 MYO1AQ9UBC5 1043 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 ARHGAP25P42331 645 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 SETQ01105 290 aaPredicted RBP21.16■□□□□ 0.98
MMP28-204ENST00000615136 TUBB2AQ13885 445 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 MCF2L2Q86YR7 1114 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 REPS2Q8NFH8 660 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 TUBB2BQ9BVA1 445 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 TTYH3Q9C0H2 523 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 KCTD10Q9H3F6 313 aa21.16■□□□□ 0.98
MMP28-204ENST00000615136 SFI1A8K8P3 1242 aa21.15■□□□□ 0.98
MMP28-204ENST00000615136 ZBED4O75132 1171 aa21.15■□□□□ 0.98
MMP28-204ENST00000615136 HOXD13P35453 343 aa21.15■□□□□ 0.98
MMP28-204ENST00000615136 ITGB3BPQ13352 177 aaPredicted RBP21.15■□□□□ 0.98
MMP28-204ENST00000615136 RINT1Q6NUQ1 792 aa21.15■□□□□ 0.98
MMP28-204ENST00000615136 GPR161Q8N6U8 529 aaKnown RBP21.15■□□□□ 0.98
MMP28-204ENST00000615136 TUFT1Q9NNX1 390 aa21.15■□□□□ 0.98
MMP28-204ENST00000615136 AGPAT5Q9NUQ2 364 aa21.15■□□□□ 0.98
MMP28-204ENST00000615136 LUC7L2Q9Y383 392 aaKnown RBP21.15■□□□□ 0.98
MMP28-204ENST00000615136 STK24Q9Y6E0 443 aa21.15■□□□□ 0.98
MMP28-204ENST00000615136 DHX15O43143 795 aaKnown RBP21.14■□□□□ 0.98
MMP28-204ENST00000615136 ZRANB2O95218 330 aaKnown RBP eCLIP21.14■□□□□ 0.98
MMP28-204ENST00000615136 HOXA7P31268 230 aaPredicted RBP21.14■□□□□ 0.98
MMP28-204ENST00000615136 TKFCQ3LXA3 575 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 ZNF569Q5MCW4 686 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 NSMFQ6X4W1 530 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 RETREG2Q8NC44 543 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 BANK1Q8NDB2 785 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 CHP1Q99653 195 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 TEKT3Q9BXF9 490 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 UBIAD1Q9Y5Z9 338 aa21.14■□□□□ 0.98
MMP28-204ENST00000615136 USP2O75604 605 aaPredicted RBP21.14■□□□□ 0.97
MMP28-204ENST00000615136 NDUFA10O95299 355 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 MYBP10242 640 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 BMS1Q14692 1282 aaKnown RBP21.14■□□□□ 0.97
MMP28-204ENST00000615136 MEA1Q16626 185 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 PCNX4Q63HM2 1172 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.14■□□□□ 0.97
MMP28-204ENST00000615136 RABGGTAQ92696 567 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 GOLGA1Q92805 767 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 C12orf42Q96LP6 360 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 CDC23Q9UJX2 597 aa21.14■□□□□ 0.97
MMP28-204ENST00000615136 CTDP1Q9Y5B0 961 aaPredicted RBP21.14■□□□□ 0.97
MMP28-204ENST00000615136 FRMPD4Q14CM0 1322 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 TRAF5O00463 557 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 DMTNQ08495 405 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 PGM5Q15124 567 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 VWA3BQ502W6 1294 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 CCDC155Q8N6L0 562 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 TSG101Q99816 390 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 NUP58Q9BVL2 599 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 NDST4Q9H3R1 872 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 RNF146Q9NTX7 359 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 REXO2Q9Y3B8 237 aaKnown RBP21.13■□□□□ 0.97
MMP28-204ENST00000615136 FHOD1Q9Y613 1164 aa21.13■□□□□ 0.97
MMP28-204ENST00000615136 ADM5C9JUS6 153 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 UTP14CQ5TAP6 766 aaKnown RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 WDR59Q6PJI9 974 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 RNF207Q6ZRF8 634 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 C1orf186Q6ZWK4 172 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 EPM2AIP1Q7L775 607 aaPredicted RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 SLC35F6Q8N357 371 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 CNKSR2Q8WXI2 1034 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 RNF181Q9P0P0 153 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 ZNF214Q9UL59 606 aaPredicted RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 AFG3L2Q9Y4W6 797 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 EPN1Q9Y6I3 576 aaPredicted RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 CTAGE9A4FU28 777 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 EPHB6O15197 1021 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 BCRP11274 1271 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 MYCLP12524 364 aaPredicted RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 YBX3P16989 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
MMP28-204ENST00000615136 DSG3P32926 999 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 BAATQ14032 418 aaPredicted RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 TMEM132BQ14DG7 1078 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 EPHA7Q15375 998 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 TEX35Q5T0J7 233 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 SNRNP48Q6IEG0 339 aaKnown RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 TMCO3Q6UWJ1 677 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 SRGAP1Q7Z6B7 1085 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 ERGIC2Q96RQ1 377 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 RIT2Q99578 217 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 LXNQ9BS40 222 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 ZMYND15Q9H091 742 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 AGO4Q9HCK5 861 aaKnown RBP21.12■□□□□ 0.97
MMP28-204ENST00000615136 ADAMTS5Q9UNA0 930 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms