RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PDIA5Q14554 519 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 LY6KQ17RY6 165 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 TMEM266Q2M3C6 531 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 CCDC144BQ3MJ40 725 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 GNPTABQ3T906 1256 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 TRIM60Q495X7 471 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 TMEM119Q4V9L6 283 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 NAALADL2Q58DX5 795 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 CCSAPQ6IQ19 270 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-205ENST00000614931 CAVIN1Q6NZI2 390 aaKnown RBP9.03□□□□□ -0.96
PCDH9-205ENST00000614931 POTEBQ6S5H4 581 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 CCDC73Q6ZRK6 1079 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 KCNK18Q7Z418 384 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 CABP7Q86V35 215 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 PDILTQ8N807 584 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 KLHDC9Q8NEP7 349 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 SNX29Q8TEQ0 813 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 AK8Q96MA6 479 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 UPF3AQ9H1J1 476 aaKnown RBP9.03□□□□□ -0.96
PCDH9-205ENST00000614931 VTA1Q9NP79 307 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 DISC1Q9NRI5 854 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 WRAP73Q9P2S5 460 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-205ENST00000614931 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 KCNH3Q9ULD8 1083 aa9.03□□□□□ -0.96
PCDH9-205ENST00000614931 CEP290O15078 2479 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 A0A1W2PQ45 241 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-205ENST00000614931 A0A1W2PQY0 241 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 B4DLN1 442 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 POLR2DO15514 142 aaKnown RBP9.02□□□□□ -0.97
PCDH9-205ENST00000614931 PRR29P0C7W0 189 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 PLCG1P19174 1290 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 CST5P28325 142 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-205ENST00000614931 SYKP43405 635 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 ACLYP53396 1101 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 UGCGQ16739 394 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 LONRF3Q496Y0 759 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 HYIQ5T013 277 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 PDXDC2PQ6P474 469 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 CYFIP1Q7L576 1253 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 GRAMD1CQ8IYS0 662 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 DHX58Q96C10 678 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 DYDC2Q96IM9 177 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 CDHR1Q96JP9 859 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 MPHOSPH6Q99547 160 aaKnown RBP9.02□□□□□ -0.97
PCDH9-205ENST00000614931 MTRQ99707 1265 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 EIF2AK1Q9BQI3 630 aaKnown RBP9.02□□□□□ -0.97
PCDH9-205ENST00000614931 UBE2OQ9C0C9 1292 aaKnown RBP9.02□□□□□ -0.97
PCDH9-205ENST00000614931 CLSTN2Q9H4D0 955 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 TBC1D22BQ9NU19 505 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 BLOC1S4Q9NUP1 217 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 FAM13BQ9NYF5 915 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 RGL1Q9NZL6 768 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 SLC9A2Q9UBY0 812 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 DDX41Q9UJV9 622 aaKnown RBP9.02□□□□□ -0.97
PCDH9-205ENST00000614931 ATP11BQ9Y2G3 1177 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 LTBP2Q14767 1821 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 DNAH12Q6ZR08 3092 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 EVPLQ92817 2033 aa9.02□□□□□ -0.97
PCDH9-205ENST00000614931 TRIP12Q14669 1992 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 GSTTP1A0A1W2PQM5 241 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 MYADML2A6NDP7 307 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 MOXD2PA6NHM9 499 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 SOX1O00570 391 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 ZBTB39O15060 712 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 CTAGE5O15320 804 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 MAFGO15525 162 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 GGPS1O95749 300 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 SMPD1P17405 629 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 CCT6AP40227 531 aaKnown RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 UBA7P41226 1012 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 GJA9P57773 515 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 IRX5P78411 483 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 KRT76Q01546 638 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 SP4Q02446 784 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 CYP4A11Q02928 519 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 TNFAIP2Q03169 654 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 TLE2Q04725 743 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 ARHGAP1Q07960 439 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 CTTNQ14247 550 aaKnown RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 EPHA7Q15375 998 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 ZRSR1Q15695 479 aaKnown RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 KCNA10Q16322 511 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 SKOR2Q2VWA4 1001 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 CELF3Q5SZQ8 465 aaKnown RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 KRBA2Q6ZNG9 492 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 MIER3Q7Z3K6 550 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 CATSPER3Q86XQ3 398 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 TDHQ8IZJ6 230 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 PCSK9Q8NBP7 692 aaKnown RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 BANK1Q8NDB2 785 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 SCFD2Q8WU76 684 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 STAMQ92783 540 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 KAT6AQ92794 2004 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 ERCC4Q92889 916 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 PCYT2Q99447 389 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 SENP7Q9BQF6 1050 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms