RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 SPATA31C2B4DYI2 1134 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 HOXA13P31271 388 aaPredicted RBP11.13□□□□□ -0.63
SNX9-202ENST00000614703 MGAT3Q09327 533 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
SNX9-202ENST00000614703 XRRA1Q6P2D8 792 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 ADGRD2Q7Z7M1 963 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 SUSD6Q92537 303 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
SNX9-202ENST00000614703 UBAC1Q9BSL1 405 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 OSBPL7Q9BZF2 842 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
SNX9-202ENST00000614703 NEDD4P46934 1319 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 KLRF2D3W0D1 207 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 OPLAHO14841 1288 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 GLP2RO95838 553 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 HOXB8P17481 243 aaPredicted RBP11.12□□□□□ -0.63
SNX9-202ENST00000614703 DNAJB1P25685 340 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 ID4P47928 161 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 MTMR3Q13615 1198 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 SPOUT1Q5T280 376 aaKnown RBP11.12□□□□□ -0.63
SNX9-202ENST00000614703 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
SNX9-202ENST00000614703 NLRX1Q86UT6 975 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 FCHSD1Q86WN1 690 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 TBC1D10CQ8IV04 446 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
SNX9-202ENST00000614703 IL31RAQ8NI17 732 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 ATP8B4Q8TF62 1192 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 NKD2Q969F2 451 aaPredicted RBP11.12□□□□□ -0.63
SNX9-202ENST00000614703 MTMR8Q96EF0 704 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 FAM227BQ96M60 508 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 KRT23Q9C075 422 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 CNNM2Q9H8M5 875 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 ERAP1Q9NZ08 941 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 SORCS3Q9UPU3 1222 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 CDY2AQ9Y6F7 541 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 DOCK5Q9H7D0 1870 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 LAMA4Q16363 1823 aa11.12□□□□□ -0.63
SNX9-202ENST00000614703 PLXNA4Q9HCM2 1894 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 SCG2P13521 617 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 MRPS6P82932 125 aaKnown RBP11.11□□□□□ -0.63
SNX9-202ENST00000614703 GRIK4Q16099 956 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 DUSP6Q16828 381 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 PAN2Q504Q3 1202 aaKnown RBP11.11□□□□□ -0.63
SNX9-202ENST00000614703 ODR4Q5SWX8 454 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 TMEM184AQ6ZMB5 413 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 ASCL5Q7RTU5 278 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 RASGRP4Q8TDF6 673 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 OTUD7AQ8TE49 926 aaPredicted RBP11.11□□□□□ -0.63
SNX9-202ENST00000614703 DNAJB3Q8WWF6 145 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
SNX9-202ENST00000614703 NECTIN4Q96NY8 510 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 PUF60Q9UHX1 559 aaKnown RBP11.11□□□□□ -0.63
SNX9-202ENST00000614703 DCHS1Q96JQ0 3298 aa11.11□□□□□ -0.63
SNX9-202ENST00000614703 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 GVINP1Q7Z2Y8 2422 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 MBLAC1A4D2B0 266 aaPredicted RBP11.1□□□□□ -0.63
SNX9-202ENST00000614703 B4E1Z4 1266 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 CD52P31358 61 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 TCF7P36402 384 aaPredicted RBP11.1□□□□□ -0.63
SNX9-202ENST00000614703 PAK2Q13177 524 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 NMIQ13287 307 aaPredicted RBP11.1□□□□□ -0.63
SNX9-202ENST00000614703 IMMTQ16891 758 aaKnown RBP11.1□□□□□ -0.63
SNX9-202ENST00000614703 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 CES5AQ6NT32 575 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 RUFY4Q6ZNE9 571 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 ZNF589Q86UQ0 364 aaPredicted RBP11.1□□□□□ -0.63
SNX9-202ENST00000614703 HOMER1Q86YM7 354 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 CRIPAKQ8N1N5 446 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 SEPT1Q8WYJ6 367 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 GLG1Q92896 1179 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 CUL5Q93034 780 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 MFSD1Q9H3U5 465 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 SMARCAD1Q9H4L7 1026 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 NGRNQ9NPE2 291 aaKnown RBP11.1□□□□□ -0.63
SNX9-202ENST00000614703 ZSWIM5Q9P217 1185 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 LZTS1Q9Y250 596 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 PCDHB7Q9Y5E2 793 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 ZNF292O60281 2723 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 MYO10Q9HD67 2058 aa11.1□□□□□ -0.63
SNX9-202ENST00000614703 SALL3Q9BXA9 1300 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 PNMA6FA0A0J9YX94 578 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 PER2O15055 1255 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 TECP42680 631 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 SARSP49591 514 aaKnown RBP11.09□□□□□ -0.63
SNX9-202ENST00000614703 PDE1AP54750 535 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 MRPS9P82933 396 aaKnown RBP11.09□□□□□ -0.63
SNX9-202ENST00000614703 SP4Q02446 784 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 C20orf194Q5TEA3 1177 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
SNX9-202ENST00000614703 ANKRD54Q6NXT1 300 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
SNX9-202ENST00000614703 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms