RNA–Protein interactions for RNA: ENST00000613864.4

TARDBP-215, Transcript of TAR DNA binding protein, humanhuman

TSL 4

Gene TARDBP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-215ENST00000613864 GRIK4Q16099 956 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 TAF2Q6P1X5 1199 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 SRBD1Q8N5C6 995 aaKnown RBP16.52■□□□□ 0.24
TARDBP-215ENST00000613864 SMARCC2Q8TAQ2 1214 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 DNAJB3Q8WWF6 145 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 MSLNLQ96KJ4 702 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 MAP3K14Q99558 947 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 C11orf84Q9BUA3 381 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-215ENST00000613864 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 PLAGL2Q9UPG8 496 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 UBIAD1Q9Y5Z9 338 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.24
TARDBP-215ENST00000613864 PLXNA4Q9HCM2 1894 aa16.52■□□□□ 0.23
TARDBP-215ENST00000613864 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
TARDBP-215ENST00000613864 MMP1P03956 469 aa16.51■□□□□ 0.23
TARDBP-215ENST00000613864 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
TARDBP-215ENST00000613864 PPFIA1Q13136 1202 aa16.51■□□□□ 0.23
TARDBP-215ENST00000613864 NCOA7Q8NI08 942 aa16.51■□□□□ 0.23
TARDBP-215ENST00000613864 SEPT1Q8WYJ6 367 aa16.51■□□□□ 0.23
TARDBP-215ENST00000613864 GPRASP2Q96D09 838 aa16.51■□□□□ 0.23
TARDBP-215ENST00000613864 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
TARDBP-215ENST00000613864 ERICH2A1L162 156 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 ITGB1P05556 798 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 MARK3P27448 753 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 CD52P31358 61 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 MRE11P49959 708 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 BTG3Q14201 252 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-215ENST00000613864 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-215ENST00000613864 TSHZ1Q6ZSZ6 1077 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 ADGRD2Q7Z7M1 963 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 NLRX1Q86UT6 975 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
TARDBP-215ENST00000613864 GIMAP8Q8ND71 665 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-215ENST00000613864 SPPL3Q8TCT6 385 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
TARDBP-215ENST00000613864 IGFLR1Q9H665 355 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 MUTYHQ9UIF7 546 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 TUBE1Q9UJT0 475 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 FAM50BQ9Y247 325 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 RWDD3Q9Y3V2 267 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
TARDBP-215ENST00000613864 SGSM2O43147 1006 aa16.49■□□□□ 0.23
TARDBP-215ENST00000613864 EYA4O95677 639 aa16.49■□□□□ 0.23
TARDBP-215ENST00000613864 INSRRP14616 1297 aa16.49■□□□□ 0.23
TARDBP-215ENST00000613864 MRPS6P82932 125 aaKnown RBP16.49■□□□□ 0.23
TARDBP-215ENST00000613864 SMAD4Q13485 552 aaKnown RBP16.49■□□□□ 0.23
TARDBP-215ENST00000613864 UBE2SQ16763 222 aa16.49■□□□□ 0.23
TARDBP-215ENST00000613864 P2RX5Q93086 422 aa16.49■□□□□ 0.23
TARDBP-215ENST00000613864 PLVAPQ9BX97 442 aa16.49■□□□□ 0.23
TARDBP-215ENST00000613864 ERAP1Q9NZ08 941 aa16.49■□□□□ 0.23
TARDBP-215ENST00000613864 FNDC1Q4ZHG4 1894 aaPredicted RBP16.48■□□□□ 0.23
TARDBP-215ENST00000613864 CSPG5O95196 566 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 GATMP50440 423 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 RALYLQ86SE5 291 aaKnown RBP16.48■□□□□ 0.23
TARDBP-215ENST00000613864 CUL5Q93034 780 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 KCNH6Q9H252 994 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 TMX1Q9H3N1 280 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 SMARCAD1Q9H4L7 1026 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 PSTPIP2Q9H939 334 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 CD207Q9UJ71 328 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 SQORQ9Y6N5 450 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 EVPLQ92817 2033 aa16.48■□□□□ 0.23
TARDBP-215ENST00000613864 ZDBF2Q9HCK1 2354 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 DDAH1O94760 285 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 IGBP1P78318 339 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
TARDBP-215ENST00000613864 KLHL23Q8NBE8 558 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 TRAPPC12Q8WVT3 735 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
TARDBP-215ENST00000613864 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 PCDHGC5Q9Y5F6 944 aa16.47■□□□□ 0.23
TARDBP-215ENST00000613864 STXBP3O00186 592 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 GLP2RO95838 553 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 RXRAP19793 462 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 MTMR1Q13613 665 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 PLCB4Q15147 1175 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.23
TARDBP-215ENST00000613864 EDAQ92838 391 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 GLG1Q92896 1179 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 CDHR1Q96JP9 859 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 PHOX2BQ99453 314 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 FAM49AQ9H0Q0 323 aaPredicted RBP16.46■□□□□ 0.23
TARDBP-215ENST00000613864 PCDHA6Q9UN73 950 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 PCDHA8Q9Y5H6 950 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 PCDHA2Q9Y5H9 948 aa16.46■□□□□ 0.23
TARDBP-215ENST00000613864 RBM8AQ9Y5S9 174 aaKnown RBP16.46■□□□□ 0.23
TARDBP-215ENST00000613864 IGSF9BQ9UPX0 1349 aa16.45■□□□□ 0.22
TARDBP-215ENST00000613864 RRN3P2A6NIE6 340 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms