RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TUBE1Q9UJT0 475 aa27■■□□□ 1.91
MMP28-203ENST00000612672 KMT2EQ8IZD2 1858 aa27■■□□□ 1.91
MMP28-203ENST00000612672 CD52P31358 61 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 TRDNQ13061 729 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 HERC4Q5GLZ8 1057 aaPredicted RBP26.99■■□□□ 1.91
MMP28-203ENST00000612672 TAF2Q6P1X5 1199 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 SMARCC2Q8TAQ2 1214 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 IGDCC4Q8TDY8 1250 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 MSLNLQ96KJ4 702 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 PHOX2BQ99453 314 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 PKD2L1Q9P0L9 805 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 PLAGL2Q9UPG8 496 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 PCDHGC5Q9Y5F6 944 aa26.99■■□□□ 1.91
MMP28-203ENST00000612672 DMDP11532 3685 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 PIK3CDO00329 1044 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 NCK2O43639 380 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 ITGB1P05556 798 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 GATMP50440 423 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 ADAM15Q13444 863 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 TSHZ1Q6ZSZ6 1077 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 MB21D2Q8IYB1 491 aaPredicted RBP26.98■■□□□ 1.91
MMP28-203ENST00000612672 PCYT2Q99447 389 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 SPZ1Q9BXG8 430 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 CLEC1BQ9P126 229 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 RWDD3Q9Y3V2 267 aa26.98■■□□□ 1.91
MMP28-203ENST00000612672 FNDC1Q4ZHG4 1894 aaPredicted RBP26.98■■□□□ 1.91
MMP28-203ENST00000612672 CFAP54Q96N23 3096 aa26.97■■□□□ 1.91
MMP28-203ENST00000612672 ZDBF2Q9HCK1 2354 aa26.97■■□□□ 1.91
MMP28-203ENST00000612672 PLEKHA8P1O95397 391 aa26.97■■□□□ 1.91
MMP28-203ENST00000612672 EXOC6Q8TAG9 804 aa26.97■■□□□ 1.91
MMP28-203ENST00000612672 CD207Q9UJ71 328 aa26.97■■□□□ 1.91
MMP28-203ENST00000612672 STXBP3O00186 592 aa26.96■■□□□ 1.91
MMP28-203ENST00000612672 IGBP1P78318 339 aa26.96■■□□□ 1.91
MMP28-203ENST00000612672 MRPS6P82932 125 aaKnown RBP26.96■■□□□ 1.91
MMP28-203ENST00000612672 XRRA1Q6P2D8 792 aa26.96■■□□□ 1.91
MMP28-203ENST00000612672 NLRX1Q86UT6 975 aa26.96■■□□□ 1.91
MMP28-203ENST00000612672 CMTR1Q8N1G2 835 aaKnown RBP26.96■■□□□ 1.91
MMP28-203ENST00000612672 SPPL3Q8TCT6 385 aa26.96■■□□□ 1.91
MMP28-203ENST00000612672 GPRASP2Q96D09 838 aa26.96■■□□□ 1.91
MMP28-203ENST00000612672 LY9Q9HBG7 655 aa26.96■■□□□ 1.91
MMP28-203ENST00000612672 ERICH2A1L162 156 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 GLP2RO95838 553 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 TMEM62Q0P6H9 643 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 UBE2SQ16763 222 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 PAN2Q504Q3 1202 aaKnown RBP26.95■■□□□ 1.9
MMP28-203ENST00000612672 TTC22Q5TAA0 569 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 CATIPQ7Z7H3 387 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 ZNF654Q8IZM8 581 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 PRSS33Q8NF86 280 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 SEPT1Q8WYJ6 367 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 PLVAPQ9BX97 442 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 FAM49AQ9H0Q0 323 aaPredicted RBP26.95■■□□□ 1.9
MMP28-203ENST00000612672 KCNH6Q9H252 994 aa26.95■■□□□ 1.9
MMP28-203ENST00000612672 U3KPZ7 1027 aaPredicted RBP26.95■■□□□ 1.9
MMP28-203ENST00000612672 RALYLQ86SE5 291 aaKnown RBP26.94■■□□□ 1.9
MMP28-203ENST00000612672 SRBD1Q8N5C6 995 aaKnown RBP26.94■■□□□ 1.9
MMP28-203ENST00000612672 NCOA7Q8NI08 942 aa26.94■■□□□ 1.9
MMP28-203ENST00000612672 TRAPPC12Q8WVT3 735 aa26.94■■□□□ 1.9
MMP28-203ENST00000612672 CUL5Q93034 780 aa26.94■■□□□ 1.9
MMP28-203ENST00000612672 UPF3BQ9BZI7 483 aaKnown RBP26.94■■□□□ 1.9
MMP28-203ENST00000612672 ERAP1Q9NZ08 941 aa26.94■■□□□ 1.9
MMP28-203ENST00000612672 UBIAD1Q9Y5Z9 338 aa26.94■■□□□ 1.9
MMP28-203ENST00000612672 EYA4O95677 639 aa26.93■■□□□ 1.9
MMP28-203ENST00000612672 CHMLP26374 656 aa26.93■■□□□ 1.9
MMP28-203ENST00000612672 NDUFV1P49821 464 aa26.93■■□□□ 1.9
MMP28-203ENST00000612672 AAMPQ13685 434 aa26.93■■□□□ 1.9
MMP28-203ENST00000612672 CMTR2Q8IYT2 770 aaKnown RBP26.93■■□□□ 1.9
MMP28-203ENST00000612672 KLHL23Q8NBE8 558 aa26.93■■□□□ 1.9
MMP28-203ENST00000612672 GIMAP8Q8ND71 665 aaPredicted RBP26.93■■□□□ 1.9
MMP28-203ENST00000612672 P2RX5Q93086 422 aa26.93■■□□□ 1.9
MMP28-203ENST00000612672 RRP36Q96EU6 259 aaKnown RBP26.93■■□□□ 1.9
MMP28-203ENST00000612672 POP1Q99575 1024 aaKnown RBP26.93■■□□□ 1.9
MMP28-203ENST00000612672 hCG_1642624A0A1W2PR95 340 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 INSRRP14616 1297 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 RXRAP19793 462 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 RBM10P98175 930 aaKnown RBP26.92■■□□□ 1.9
MMP28-203ENST00000612672 IER5LQ5T953 404 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 RSPH3Q86UC2 560 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 EDAQ92838 391 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 GLG1Q92896 1179 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 TMX1Q9H3N1 280 aa26.92■■□□□ 1.9
MMP28-203ENST00000612672 BARX2Q9UMQ3 279 aaPredicted RBP26.92■■□□□ 1.9
MMP28-203ENST00000612672 NPAS4Q8IUM7 802 aa26.91■■□□□ 1.9
MMP28-203ENST00000612672 SMRP1Q8NCR6 262 aa26.91■■□□□ 1.9
MMP28-203ENST00000612672 POF1BQ8WVV4 589 aa26.91■■□□□ 1.9
MMP28-203ENST00000612672 PADI3Q9ULW8 664 aa26.91■■□□□ 1.9
MMP28-203ENST00000612672 NRIP1P48552 1158 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 MTMR1Q13613 665 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 SART3Q15020 963 aaKnown RBP26.9■■□□□ 1.9
MMP28-203ENST00000612672 RAB11FIP4Q86YS3 637 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 EFHBQ8N7U6 833 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 MFSD14AQ96MC6 490 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 MAP3K14Q99558 947 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 SMARCAD1Q9H4L7 1026 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 HCSTQ9UBK5 93 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 TRPV2Q9Y5S1 764 aa26.9■■□□□ 1.9
MMP28-203ENST00000612672 EVPLQ92817 2033 aa26.89■■□□□ 1.9
MMP28-203ENST00000612672 LOC730098B7Z3J9 87 aa26.89■■□□□ 1.9
MMP28-203ENST00000612672 DDAH1O94760 285 aa26.89■■□□□ 1.9
MMP28-203ENST00000612672 RBM23Q86U06 439 aaKnown RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 828.5 ms