RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
LINC01278-204ENST00000609143 PXMP2Q9NR77 195 aa12.67□□□□□ -0.38
LINC01278-204ENST00000609143 COL11A1P12107 1806 aaPredicted RBP12.67□□□□□ -0.38
LINC01278-204ENST00000609143 DDX39AO00148 427 aaKnown RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 ATP2A1O14983 1001 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 PPP1R12BO60237 982 aaPredicted RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 GNA14O95837 355 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 CCDC175P0C221 793 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 GTF2F1P35269 517 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 SYCP1Q15431 976 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 LXNQ9BS40 222 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 TBC1D22BQ9NU19 505 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 HOXC10Q9NYD6 342 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 KCND2Q9NZV8 630 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 PKD2L1Q9P0L9 805 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 CAPN11Q9UMQ6 739 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 RIPK3Q9Y572 518 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 LOXHD1Q8IVV2 1947 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 FAM13AO94988 1023 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 MYCLP12524 364 aaPredicted RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 TRIM21P19474 475 aaKnown RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 BAATQ14032 418 aaPredicted RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 EDRF1Q3B7T1 1238 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 CYP26C1Q6V0L0 522 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 OR8K1Q8NGG5 319 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 KCTD10Q9H3F6 313 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
LINC01278-204ENST00000609143 CSADQ9Y600 493 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 SNCAIPQ9Y6H5 919 aa12.66□□□□□ -0.38
LINC01278-204ENST00000609143 VGLL4Q14135 290 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.38
LINC01278-204ENST00000609143 OLFML3Q9NRN5 406 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 RNF225M0QZC1 329 aaPredicted RBP12.65□□□□□ -0.38
LINC01278-204ENST00000609143 DHX15O43143 795 aaKnown RBP12.65□□□□□ -0.38
LINC01278-204ENST00000609143 ETF1P62495 437 aaKnown RBP12.65□□□□□ -0.38
LINC01278-204ENST00000609143 ITGB3BPQ13352 177 aaPredicted RBP12.65□□□□□ -0.38
LINC01278-204ENST00000609143 MTF1Q14872 753 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 TMEM132BQ14DG7 1078 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 FIGNQ5HY92 759 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 C1orf186Q6ZWK4 172 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 EPM2AIP1Q7L775 607 aaPredicted RBP12.65□□□□□ -0.38
LINC01278-204ENST00000609143 DNAJC7Q99615 494 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 DESI2Q9BSY9 194 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 MAF1Q9H063 256 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 MRPL44Q9H9J2 332 aaKnown RBP12.65□□□□□ -0.38
LINC01278-204ENST00000609143 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
LINC01278-204ENST00000609143 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 RSPH10B2B2RC85 870 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ADM5C9JUS6 153 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 RSPH10BP0C881 870 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 CCND2P30279 289 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 KNOP1Q1ED39 458 aaKnown RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 BMT2Q1RMZ1 405 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 BANK1Q8NDB2 785 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ACAD9Q9H845 621 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 SAMM50Q9Y512 469 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 CETN3O15182 167 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 IREB2P48200 963 aaKnown RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 CASP5P51878 434 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 SYT10Q6XYQ8 523 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ZNF397Q8NF99 534 aaPredicted RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 TTYH3Q9C0H2 523 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 PARVGQ9HBI0 331 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 WRAP73Q9P2S5 460 aaPredicted RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ODF2LQ9ULJ1 636 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 PHLPP2Q6ZVD8 1323 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 A0A1W2PQJ5 194 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 CALUO43852 315 aaPredicted RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 GCNT3O95395 438 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 YBX3P16989 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ZBED6P86452 979 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ADAM9Q13443 819 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 MYCT1Q8N699 235 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 NSUN6Q8TEA1 469 aaKnown RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 ZNHIT6Q9NWK9 470 aaKnown RBP12.64□□□□□ -0.39
LINC01278-204ENST00000609143 TRAF3IP3Q9Y228 551 aa12.64□□□□□ -0.39
LINC01278-204ENST00000609143 PDXKO00764 312 aa12.63□□□□□ -0.39
LINC01278-204ENST00000609143 ZBTB39O15060 712 aa12.63□□□□□ -0.39
LINC01278-204ENST00000609143 MYBP10242 640 aa12.63□□□□□ -0.39
LINC01278-204ENST00000609143 JAK3P52333 1124 aa12.63□□□□□ -0.39
LINC01278-204ENST00000609143 MARSP56192 900 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms