RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 CEP250Q9BV73 2442 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 POTEMA6NI47 508 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 HIDE1A8MVS5 230 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 CFBP00751 764 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 AOC1P19801 751 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 CD52P31358 61 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 ATXN1P54253 815 aaKnown RBP10.85□□□□□ -0.67
CTCFL-220ENST00000608858 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 SPECC1Q5M775 1068 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 TSHZ3Q63HK5 1081 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 TRIM50Q86XT4 487 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 CCDC105Q8IYK2 499 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 FEZF2Q8TBJ5 459 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 LINC01599Q8WXQ3 324 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 ZBTB10Q96DT7 871 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 IWS1Q96ST2 819 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 AGO3Q9H9G7 860 aaKnown RBP10.85□□□□□ -0.67
CTCFL-220ENST00000608858 FBXL21Q9UKT6 434 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 PCDHB13Q9Y5F0 798 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 KIAA1217Q5T5P2 1943 aa10.85□□□□□ -0.67
CTCFL-220ENST00000608858 ATMINO43313 823 aaPredicted RBP10.84□□□□□ -0.67
CTCFL-220ENST00000608858 FGF18O76093 207 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 LGALS2P05162 132 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
CTCFL-220ENST00000608858 GNAT2P19087 354 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 SP4Q02446 784 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 THNSL1Q8IYQ7 743 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 CMTR2Q8IYT2 770 aaKnown RBP10.84□□□□□ -0.67
CTCFL-220ENST00000608858 SIX5Q8N196 739 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 DNAJB3Q8WWF6 145 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 RUBCNQ92622 972 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 EHMT1Q9H9B1 1298 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 ERVK-5Q9HDB9 667 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 PXMP2Q9NR77 195 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 PCDHB12Q9Y5F1 795 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 MYH7P12883 1935 aa10.84□□□□□ -0.67
CTCFL-220ENST00000608858 ATRXP46100 2492 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 PDHBP11177 359 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 TOP1P11387 765 aaKnown RBP10.83□□□□□ -0.68
CTCFL-220ENST00000608858 GNAT1P11488 350 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 HOXD8P13378 290 aaPredicted RBP10.83□□□□□ -0.68
CTCFL-220ENST00000608858 ZNF543Q08ER8 600 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 TMEM62Q0P6H9 643 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 KCNC3Q14003 757 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 PPP4R3BQ5MIZ7 849 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 RARS2Q5T160 578 aaKnown RBP10.83□□□□□ -0.68
CTCFL-220ENST00000608858 FAM102BQ5T8I3 360 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 CES5AQ6NT32 575 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 SIRT2Q8IXJ6 389 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 KBTBD3Q8NAB2 608 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.83□□□□□ -0.68
CTCFL-220ENST00000608858 TTC3P53804 2025 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 KIAA1671Q9BY89 1806 aa10.83□□□□□ -0.68
CTCFL-220ENST00000608858 TBKBP1A7MCY6 615 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 NOP56O00567 594 aaKnown RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 CAND2O75155 1236 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 DCNP07585 359 aaKnown RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 SRGAP2BP0DMP2 458 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 HSPD1P10809 573 aaKnown RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 UBA1P22314 1058 aaKnown RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 HOXA13P31271 388 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 HOXC8P31273 242 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 CA8P35219 290 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 FBXO47Q5MNV8 452 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 TMEM184AQ6ZMB5 413 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 CYFIP1Q7L576 1253 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 CRIPAKQ8N1N5 446 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 IL31RAQ8NI17 732 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 LMBR1Q8WVP7 490 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 SEMA4AQ9H3S1 761 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 ENTPD7Q9NQZ7 604 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 AAASQ9NRG9 546 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 DBR1Q9UK59 544 aaKnown RBP10.82□□□□□ -0.68
CTCFL-220ENST00000608858 CDY2AQ9Y6F7 541 aa10.82□□□□□ -0.68
CTCFL-220ENST00000608858 NARSO43776 548 aaKnown RBP10.81□□□□□ -0.68
CTCFL-220ENST00000608858 RAB11FIP3O75154 756 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 CFHP08603 1231 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 ADAM17P78536 824 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 MGAT3Q09327 533 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 GSE1Q14687 1217 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 CDC37Q16543 378 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-220ENST00000608858 MCF2L2Q86YR7 1114 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 NPAS4Q8IUM7 802 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 RTP3Q9BQQ7 232 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 USP26Q9BXU7 913 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 FAM49AQ9H0Q0 323 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-220ENST00000608858 ADAM7Q9H2U9 754 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 RTEL1Q9NZ71 1219 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 PCDHB7Q9Y5E2 793 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 WDR19Q8NEZ3 1342 aa10.81□□□□□ -0.68
CTCFL-220ENST00000608858 FSCN2O14926 492 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms