RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 CD2BP2O95400 341 aaKnown RBP16.14■□□□□ 0.17
HDDC2-206ENST00000608461 TDP2O95551 362 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 CSF2RAP15509 400 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 JAK3P52333 1124 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 ORC2Q13416 577 aaPredicted RBP16.14■□□□□ 0.17
HDDC2-206ENST00000608461 ETNPPLQ8TBG4 499 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 PCYT2Q99447 389 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 WNT8AQ9H1J5 351 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 KCNMB3Q9NPA1 279 aa16.14■□□□□ 0.17
HDDC2-206ENST00000608461 MAFBQ9Y5Q3 323 aaPredicted RBP16.14■□□□□ 0.17
HDDC2-206ENST00000608461 DDX39AO00148 427 aaKnown RBP16.13■□□□□ 0.17
HDDC2-206ENST00000608461 BACH1O14867 736 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 DTNBO60941 627 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 IQCF3P0C7M6 154 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 SELPP16109 830 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 PPFIA1Q13136 1202 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 TAF2Q6P1X5 1199 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 RPAINQ86UA6 219 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 SLFN12Q8IYM2 578 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 ZNF302Q9NR11 478 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 SETD4Q9NVD3 440 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 SAMM50Q9Y512 469 aa16.13■□□□□ 0.17
HDDC2-206ENST00000608461 POTEB3A0JP26 581 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 MBLAC1A4D2B0 266 aaPredicted RBP16.12■□□□□ 0.17
HDDC2-206ENST00000608461 HBP1O60381 514 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
HDDC2-206ENST00000608461 CKBP12277 381 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 CCL23P55773 120 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 EARS2Q5JPH6 523 aaKnown RBP16.12■□□□□ 0.17
HDDC2-206ENST00000608461 GPR153Q6NV75 609 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 SWSAP1Q6NVH7 229 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 PDXDC2PQ6P474 469 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 POTEBQ6S5H4 581 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 B3GNT9Q6UX72 402 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 FAM167AQ96KS9 214 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 MTIF3Q9H2K0 278 aaKnown RBP16.12■□□□□ 0.17
HDDC2-206ENST00000608461 UMODL1Q5DID0 1318 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 COL1A2P08123 1366 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 TANC1Q9C0D5 1861 aa16.12■□□□□ 0.17
HDDC2-206ENST00000608461 TREHO43280 583 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 SLC37A4O43826 429 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 FGBP02675 491 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 INSRRP14616 1297 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■□□□□ 9.6
HDDC2-206ENST00000608461 TRAPPC10P48553 1259 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 PPP2R5CQ13362 524 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 CUL4AQ13619 759 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 GNL2Q13823 731 aaKnown RBP16.11■□□□□ 0.17
HDDC2-206ENST00000608461 HIC1Q14526 733 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 PLCB4Q15147 1175 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 SHHQ15465 462 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 GRIK4Q16099 956 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 TRIM71Q2Q1W2 868 aaKnown RBP16.11■□□□□ 0.17
HDDC2-206ENST00000608461 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 LRRC8DQ7L1W4 858 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 RSPH3Q86UC2 560 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 NOSTRINQ8IVI9 506 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 CCDC60Q8IWA6 550 aaPredicted RBP16.11■□□□□ 0.17
HDDC2-206ENST00000608461 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 PPP1R13LQ8WUF5 828 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 BBXQ8WY36 941 aaPredicted RBP16.11■□□□□ 0.17
HDDC2-206ENST00000608461 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
HDDC2-206ENST00000608461 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 SMC3Q9UQE7 1217 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
HDDC2-206ENST00000608461 MYH9P35579 1960 aaKnown RBP16.11■□□□□ 0.17
HDDC2-206ENST00000608461 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
HDDC2-206ENST00000608461 MARCH6O60337 910 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 DKC1O60832 514 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDDC2-206ENST00000608461 MARK3P27448 753 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 EPHB4P54760 987 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 ZNF200P98182 395 aaPredicted RBP16.1■□□□□ 0.17
HDDC2-206ENST00000608461 ZNF484Q5JVG2 852 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 FAM43BQ6ZT52 329 aaPredicted RBP16.1■□□□□ 0.17
HDDC2-206ENST00000608461 C16orf59Q7L2K0 433 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 HERVK_113Q902F9 699 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDDC2-206ENST00000608461 UNC45AQ9H3U1 944 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 TUBE1Q9UJT0 475 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 IGSF9BQ9UPX0 1349 aa16.1■□□□□ 0.17
HDDC2-206ENST00000608461 TRIOBPQ9H2D6 2365 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 ACTN1P12814 892 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 GJB2P29033 226 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 THPOP40225 353 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 FXR1P51114 621 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDDC2-206ENST00000608461 FOSBP53539 338 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 C9orf50Q5SZB4 431 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 MARCH8Q5T0T0 291 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 RASIP1Q5U651 963 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 ZNF365Q70YC5 407 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 NME8Q8N427 588 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 HAS1Q92839 578 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 SNX21Q969T3 373 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 INTS4Q96HW7 963 aaKnown RBP16.09■□□□□ 0.17
HDDC2-206ENST00000608461 SCLYQ96I15 445 aa16.09■□□□□ 0.17
HDDC2-206ENST00000608461 RNPC3Q96LT9 517 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms