RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 FBXO47Q5MNV8 452 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 NPAS4Q8IUM7 802 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 CMTR2Q8IYT2 770 aaKnown RBP18.15■□□□□ 0.5
HDDC2-203ENST00000608284 ZNF689Q96CS4 500 aaPredicted RBP18.15■□□□□ 0.5
HDDC2-203ENST00000608284 MAP3K14Q99558 947 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 PRRX2Q99811 253 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 SPZ1Q9BXG8 430 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 MUTYHQ9UIF7 546 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 SQORQ9Y6N5 450 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 COL4A6Q14031 1691 aa18.15■□□□□ 0.5
HDDC2-203ENST00000608284 SPDYE3A6NKU9 549 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 E7EWF7 191 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 IGHDP01880 384 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 CYP21A2P08686 494 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 DLX2Q07687 328 aaPredicted RBP18.14■□□□□ 0.49
HDDC2-203ENST00000608284 MGAT3Q09327 533 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 MTMR1Q13613 665 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 SLC35G1Q2M3R5 365 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 FAM43BQ6ZT52 329 aaPredicted RBP18.14■□□□□ 0.49
HDDC2-203ENST00000608284 TMTC2Q8N394 836 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 MICAL1Q8TDZ2 1067 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 EDAQ92838 391 aa18.14■□□□□ 0.49
HDDC2-203ENST00000608284 FAM49AQ9H0Q0 323 aaPredicted RBP18.14■□□□□ 0.49
HDDC2-203ENST00000608284 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
HDDC2-203ENST00000608284 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
HDDC2-203ENST00000608284 DDAH1O94760 285 aa18.13■□□□□ 0.49
HDDC2-203ENST00000608284 CD52P31358 61 aa18.13■□□□□ 0.49
HDDC2-203ENST00000608284 PAK2Q13177 524 aa18.13■□□□□ 0.49
HDDC2-203ENST00000608284 SPOUT1Q5T280 376 aaKnown RBP18.13■□□□□ 0.49
HDDC2-203ENST00000608284 SUGP1Q8IWZ8 645 aaKnown RBP18.13■□□□□ 0.49
HDDC2-203ENST00000608284 AAASQ9NRG9 546 aa18.13■□□□□ 0.49
HDDC2-203ENST00000608284 PKD2L1Q9P0L9 805 aa18.13■□□□□ 0.49
HDDC2-203ENST00000608284 TRPC6Q9Y210 931 aa18.13■□□□□ 0.49
HDDC2-203ENST00000608284 LAMA4Q16363 1823 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 GSTTP1A0A1W2PQM5 241 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 FSD2A1L4K1 749 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 MBLAC1A4D2B0 266 aaPredicted RBP18.12■□□□□ 0.49
HDDC2-203ENST00000608284 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 MEIS2O14770 477 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 KCNA2P16389 499 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 ODR4Q5SWX8 454 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 NME8Q8N427 588 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 EFHBQ8N7U6 833 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 PBXIP1Q96AQ6 731 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 SDF4Q9BRK5 362 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 PCDHB7Q9Y5E2 793 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 PCDHB12Q9Y5F1 795 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 TRPV2Q9Y5S1 764 aa18.12■□□□□ 0.49
HDDC2-203ENST00000608284 MRPL42Q9Y6G3 142 aaKnown RBP18.12■□□□□ 0.49
HDDC2-203ENST00000608284 LINC01565O15544 149 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 ATP9AO75110 1047 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 CALM1P0DP23 149 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 CALM2P0DP24 149 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 CALM3P0DP25 149 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 SCG2P13521 617 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 INSRRP14616 1297 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 IBSPP21815 317 aaPredicted RBP18.11■□□□□ 0.49
HDDC2-203ENST00000608284 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.491e-9■■□□□ 14
HDDC2-203ENST00000608284 PTPN5P54829 565 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 PAN2Q504Q3 1202 aaKnown RBP18.11■□□□□ 0.49
HDDC2-203ENST00000608284 ZNF654Q8IZM8 581 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 KLHL23Q8NBE8 558 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 SPPL3Q8TCT6 385 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 IGDCC4Q8TDY8 1250 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 POF1BQ8WVV4 589 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 TLE6Q9H808 572 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 RC3H2Q9HBD1 1191 aaKnown RBP18.11■□□□□ 0.49
HDDC2-203ENST00000608284 JPH1Q9HDC5 661 aaPredicted RBP18.11■□□□□ 0.49
HDDC2-203ENST00000608284 TELO2Q9Y4R8 837 aa18.11■□□□□ 0.49
HDDC2-203ENST00000608284 MYO7AQ13402 2215 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 TMEM221A6NGB7 291 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 M0R296 226 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 TBX10O75333 385 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 EYA4O95677 639 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 ITGB1P05556 798 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 SRGAP2BP0DMP2 458 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 NRIP1P48552 1158 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 MARCH8Q5T0T0 291 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 TRIM67Q6ZTA4 783 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 BMP8AQ7Z5Y6 402 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 RBM23Q86U06 439 aaKnown RBP18.1■□□□□ 0.49
HDDC2-203ENST00000608284 AGO3Q9H9G7 860 aaKnown RBP18.1■□□□□ 0.49
HDDC2-203ENST00000608284 JADE2Q9NQC1 790 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 SLC9A2Q9UBY0 812 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 PADI3Q9ULW8 664 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 PCDHA2Q9Y5H9 948 aa18.1■□□□□ 0.49
HDDC2-203ENST00000608284 PPFIA3O75145 1194 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 LINC00271P0C7V0 271 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 ITGB5P18084 799 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 PTH1RQ03431 593 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 COASYQ13057 564 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 MSLNLQ96KJ4 702 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 MTA3Q9BTC8 594 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 CELF4Q9BZC1 486 aaKnown RBP18.09■□□□□ 0.49
HDDC2-203ENST00000608284 PCDHA6Q9UN73 950 aa18.09■□□□□ 0.49
HDDC2-203ENST00000608284 PCDHA8Q9Y5H6 950 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms