RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PCDHB6Q9Y5E3 794 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 NRCAMQ92823 1304 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 C17orf102A2RUQ5 167 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 B4GALT4O60513 344 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 DKC1O60832 514 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTSA-219ENST00000607841 CD4P01730 458 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 SMIM10L2AP0DMW4 78 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 SMIM10L2BP0DMW5 78 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 MARK3P27448 753 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 TMEM266Q2M3C6 531 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 CCDC60Q8IWA6 550 aaPredicted RBP16.05■□□□□ 0.16
CTSA-219ENST00000607841 CKAP2LQ8IYA6 745 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 RNPEPQ9H4A4 650 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 PRDM5Q9NQX1 630 aaPredicted RBP16.05■□□□□ 0.16
CTSA-219ENST00000607841 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
CTSA-219ENST00000607841 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
CTSA-219ENST00000607841 MAFBQ9Y5Q3 323 aaPredicted RBP16.05■□□□□ 0.16
CTSA-219ENST00000607841 BMP15O95972 392 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 RESTQ13127 1097 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 PTGDRQ13258 359 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 NBR1Q14596 966 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 EPHA7Q15375 998 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 PTGISQ16647 500 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 FAM167AQ96KS9 214 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 RAB34Q9BZG1 259 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 TRMT13Q9NUP7 481 aaKnown RBP16.04■□□□□ 0.16
CTSA-219ENST00000607841 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
CTSA-219ENST00000607841 TRPC6Q9Y210 931 aa16.04■□□□□ 0.16
CTSA-219ENST00000607841 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 RRN3P2A6NIE6 340 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 HBP1O60381 514 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
CTSA-219ENST00000607841 ZSCAN22P10073 491 aaPredicted RBP16.03■□□□□ 0.16
CTSA-219ENST00000607841 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
CTSA-219ENST00000607841 PRPHP41219 470 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 PPFIA1Q13136 1202 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 PLCB4Q15147 1175 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 GDF6Q6KF10 455 aaPredicted RBP16.03■□□□□ 0.16
CTSA-219ENST00000607841 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 ATP8B4Q8TF62 1192 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 PPP1R13LQ8WUF5 828 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
CTSA-219ENST00000607841 PDLIM7Q9NR12 457 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 NRBP2Q9NSY0 501 aa16.03■□□□□ 0.16
CTSA-219ENST00000607841 IGSF9BQ9UPX0 1349 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 EML1O00423 815 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 KIAA0355O15063 1070 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 RAG1P15918 1043 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 TECP42680 631 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
CTSA-219ENST00000607841 PSMC5P62195 406 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 SPIRE1Q08AE8 756 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 DTHD1Q6ZMT9 781 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 CCDC155Q8N6L0 562 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 NEK9Q8TD19 979 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 SETD4Q9NVD3 440 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 TBX21Q9UL17 535 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
CTSA-219ENST00000607841 PDE4DIPQ5VU43 2346 aa16.02■□□□□ 0.15
CTSA-219ENST00000607841 OATP04181 439 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 INSRRP14616 1297 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 HOXC8P31273 242 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
CTSA-219ENST00000607841 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
CTSA-219ENST00000607841 PTK7Q13308 1070 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 BFSP2Q13515 415 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 PDIA5Q14554 519 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 GRIK4Q16099 956 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 ZNF484Q5JVG2 852 aa16.01■□□□□ 0.15
CTSA-219ENST00000607841 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
CTSA-219ENST00000607841 LBHD1Q9BQE6 289 aaPredicted RBP16.01■□□□□ 0.15
CTSA-219ENST00000607841 ZMYND8Q9ULU4 1186 aaPredicted RBP16.01■□□□□ 0.15
CTSA-219ENST00000607841 SCN10AQ9Y5Y9 1956 aa16■□□□□ 0.15
CTSA-219ENST00000607841 TRIM43BA6NCK2 446 aa16■□□□□ 0.15
CTSA-219ENST00000607841 H0YGN5 161 aa16■□□□□ 0.15
CTSA-219ENST00000607841 TIMP1P01033 207 aa16■□□□□ 0.15
CTSA-219ENST00000607841 CYP2C9P11712 490 aa16■□□□□ 0.15
CTSA-219ENST00000607841 SYN1P17600 705 aa16■□□□□ 0.15
CTSA-219ENST00000607841 ATP4AP20648 1035 aa16■□□□□ 0.15
CTSA-219ENST00000607841 PRKCEQ02156 737 aa16■□□□□ 0.15
CTSA-219ENST00000607841 SF3A1Q15459 793 aaKnown RBP16■□□□□ 0.15
CTSA-219ENST00000607841 XKR3Q5GH77 459 aa16■□□□□ 0.15
CTSA-219ENST00000607841 SH3RF1Q7Z6J0 888 aa16■□□□□ 0.15
CTSA-219ENST00000607841 RETREG2Q8NC44 543 aa16■□□□□ 0.15
CTSA-219ENST00000607841 BANK1Q8NDB2 785 aa16■□□□□ 0.15
CTSA-219ENST00000607841 CAGE1Q8TC20 777 aa16■□□□□ 0.15
CTSA-219ENST00000607841 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
CTSA-219ENST00000607841 TRIM43Q96BQ3 446 aaPredicted RBP16■□□□□ 0.15
CTSA-219ENST00000607841 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
CTSA-219ENST00000607841 EIF2AK1Q9BQI3 630 aaKnown RBP16■□□□□ 0.15
CTSA-219ENST00000607841 HIPK3Q9H422 1215 aa16■□□□□ 0.15
CTSA-219ENST00000607841 ZSWIM4Q9H7M6 989 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms