RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 GGPS1O95749 300 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 ACRP10323 421 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 CCL23P55773 120 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 TPM4P67936 248 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 FAM47CQ5HY64 1035 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 C11orf57Q6ZUT1 292 aaPredicted RBP11.89□□□□□ -0.51
LINC01001-203ENST00000607448 WASF1Q92558 559 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 EMID1Q96A84 441 aaPredicted RBP11.89□□□□□ -0.51
LINC01001-203ENST00000607448 VWCEQ96DN2 955 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 NOC4LQ9BVI4 516 aaKnown RBP11.89□□□□□ -0.51
LINC01001-203ENST00000607448 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 PSTPIP2Q9H939 334 aa11.89□□□□□ -0.51
LINC01001-203ENST00000607448 RCAN1P53805 252 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 TRIM29Q14134 588 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 SLC39A14Q15043 492 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 BRDTQ58F21 947 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 CELF3Q5SZQ8 465 aaKnown RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 FAM109BQ6ICB4 259 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 DHX40Q8IX18 779 aaKnown RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 DHX37Q8IY37 1157 aaKnown RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 PPTC7Q8NI37 304 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 SCLYQ96I15 445 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 INPP4AQ96PE3 977 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 ALG1Q9BT22 464 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 KIAA1468Q9P260 1216 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 SIP14410 1827 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 CHD9Q3L8U1 2897 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 STXBP3O00186 592 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 GSDMDP57764 484 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 HIC1Q14526 733 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 PCNX4Q63HM2 1172 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 CUL5Q93034 780 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
LINC01001-203ENST00000607448 SPATA33Q96N06 139 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 IMPACTQ9P2X3 320 aa11.88□□□□□ -0.51
LINC01001-203ENST00000607448 SMTNL1A8MU46 457 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 SPATA31C2B4DYI2 1134 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 F2P00734 622 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-203ENST00000607448 ICAM3P32942 547 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 NDUFA8P51970 172 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 NAPAP54920 295 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 NLRP12P59046 1061 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 LAMC2Q13753 1193 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 DGKDQ16760 1214 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 GDF6Q6KF10 455 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-203ENST00000607448 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 ZNF365Q70YC5 407 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 DEFB123Q8N688 67 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 PHKBQ93100 1093 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 PCDHA6Q9UN73 950 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 PCDHA8Q9Y5H6 950 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 PRUNE2Q8WUY3 3088 aa11.87□□□□□ -0.51
LINC01001-203ENST00000607448 CHD7Q9P2D1 2997 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 REV3LO60673 3130 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 HAS3O00219 553 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 KPNA6O60684 536 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 ATP9AO75110 1047 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 TGFB3P10600 412 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 ITGB5P18084 799 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC01001-203ENST00000607448 PSEN2P49810 448 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 RBM10P98175 930 aaKnown RBP11.86□□□□□ -0.51
LINC01001-203ENST00000607448 PPIGQ13427 754 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC01001-203ENST00000607448 NTRK3Q16288 839 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 PKN1Q16512 942 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 KIAA0753Q2KHM9 967 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 AXDND1Q5T1B0 1012 aaPredicted RBP11.86□□□□□ -0.51
LINC01001-203ENST00000607448 KRT40Q6A162 431 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 CYFIP1Q7L576 1253 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 ELOA2Q8IYF1 753 aaPredicted RBP11.86□□□□□ -0.51
LINC01001-203ENST00000607448 TMEM199Q8N511 208 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 SEZ6LQ9BYH1 1024 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 KCND1Q9NSA2 647 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 BARHL2Q9NY43 387 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 CXXC1Q9P0U4 656 aaPredicted RBP11.86□□□□□ -0.51
LINC01001-203ENST00000607448 HDAC6Q9UBN7 1215 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 PAXBP1Q9Y5B6 917 aa11.86□□□□□ -0.51
LINC01001-203ENST00000607448 GRXCR1A8MXD5 290 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 KIF28PB7ZC32 967 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 IKBKBO14920 756 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 STAM2O75886 525 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 ZNF202O95125 648 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 PFKFB1P16118 471 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 CLK2P49760 499 aaKnown RBP11.85□□□□□ -0.51
LINC01001-203ENST00000607448 ZNF200P98182 395 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms