RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 ZSWIM5Q9P217 1185 aa15.42■□□□□ 0.06
CTSA-212ENST00000606394 LAMA4Q16363 1823 aa15.42■□□□□ 0.06
CTSA-212ENST00000606394 ITGB1P05556 798 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 CRIPAKQ8N1N5 446 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 GIMAP8Q8ND71 665 aaPredicted RBP15.41■□□□□ 0.06
CTSA-212ENST00000606394 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 KRT23Q9C075 422 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 BCAS3Q9H6U6 928 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
CTSA-212ENST00000606394 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
CTSA-212ENST00000606394 SQORQ9Y6N5 450 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 VPS13AQ96RL7 3174 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 CACNA1AO00555 2505 aa15.41■□□□□ 0.06
CTSA-212ENST00000606394 B4E1Z4 1266 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 PROB1E7EW31 1015 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 DNAJB1P25685 340 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 MRPS9P82933 396 aaKnown RBP15.4■□□□□ 0.06
CTSA-212ENST00000606394 NUCB1Q02818 461 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 FBXO47Q5MNV8 452 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 IFIT1BQ5T764 474 aaKnown RBP15.4■□□□□ 0.06
CTSA-212ENST00000606394 ANKRD45Q5TZF3 282 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 XRRA1Q6P2D8 792 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 FCHSD1Q86WN1 690 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 TRIM50Q86XT4 487 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 NPAS4Q8IUM7 802 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 ASIC4Q96FT7 647 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 CNNM2Q9H8M5 875 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
CTSA-212ENST00000606394 MRPL42Q9Y6G3 142 aaKnown RBP15.4■□□□□ 0.06
CTSA-212ENST00000606394 MBLAC1A4D2B0 266 aaPredicted RBP15.39■□□□□ 0.05
CTSA-212ENST00000606394 PALM3A6NDB9 673 aaPredicted RBP15.39■□□□□ 0.05
CTSA-212ENST00000606394 STAG3L1P0CL83 205 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 AVPR2P30518 371 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 NRIP1P48552 1158 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 UBE3AQ05086 875 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 SEMA3FQ13275 785 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 KLHL23Q8NBE8 558 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 POF1BQ8WVV4 589 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 SUSD6Q92537 303 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 ATOH1Q92858 354 aaPredicted RBP15.39■□□□□ 0.05
CTSA-212ENST00000606394 CDCA3Q99618 268 aaPredicted RBP15.39■□□□□ 0.05
CTSA-212ENST00000606394 RIOX1Q9H6W3 641 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 TUBE1Q9UJT0 475 aa15.39■□□□□ 0.05
CTSA-212ENST00000606394 GLP2RO95838 553 aa15.38■□□□□ 0.05
CTSA-212ENST00000606394 PPFIA1Q13136 1202 aa15.38■□□□□ 0.05
CTSA-212ENST00000606394 PTPN21Q16825 1174 aa15.38■□□□□ 0.05
CTSA-212ENST00000606394 IMMTQ16891 758 aaKnown RBP15.38■□□□□ 0.05
CTSA-212ENST00000606394 UTP14CQ5TAP6 766 aaKnown RBP15.38■□□□□ 0.05
CTSA-212ENST00000606394 RUFY4Q6ZNE9 571 aa15.38■□□□□ 0.05
CTSA-212ENST00000606394 ADGRD2Q7Z7M1 963 aa15.38■□□□□ 0.05
CTSA-212ENST00000606394 ZFP91Q96JP5 570 aaPredicted RBP15.38■□□□□ 0.05
CTSA-212ENST00000606394 ERAP1Q9NZ08 941 aa15.38■□□□□ 0.05
CTSA-212ENST00000606394 DAXXQ9UER7 740 aaPredicted RBP15.38■□□□□ 0.05
CTSA-212ENST00000606394 BARX2Q9UMQ3 279 aaPredicted RBP15.38■□□□□ 0.05
CTSA-212ENST00000606394 GVINP1Q7Z2Y8 2422 aa15.38■□□□□ 0.05
CTSA-212ENST00000606394 PNMA6FA0A0J9YX94 578 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 CSPG5O95196 566 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 SDSP20132 328 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 VCPP55072 806 aaKnown RBP15.37■□□□□ 0.05
CTSA-212ENST00000606394 IER5Q5VY09 327 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 PCNX4Q63HM2 1172 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 PDE12Q6L8Q7 609 aaKnown RBP15.37■□□□□ 0.05
CTSA-212ENST00000606394 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 ATP8B4Q8TF62 1192 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 RPGRIP1Q96KN7 1286 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 DSCC1Q9BVC3 393 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 TLE6Q9H808 572 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 CDY2AQ9Y6F7 541 aa15.37■□□□□ 0.05
CTSA-212ENST00000606394 SRGAP2BP0DMP2 458 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 TCF7P36402 384 aaPredicted RBP15.36■□□□□ 0.05
CTSA-212ENST00000606394 MRPS6P82932 125 aaKnown RBP15.36■□□□□ 0.05
CTSA-212ENST00000606394 SEC23AQ15436 765 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 GRIK4Q16099 956 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 RBM23Q86U06 439 aaKnown RBP15.36■□□□□ 0.05
CTSA-212ENST00000606394 NLRX1Q86UT6 975 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 HOMER1Q86YM7 354 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 DNAJB3Q8WWF6 145 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 LINC01599Q8WXQ3 324 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 CDHR1Q96JP9 859 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 NEK1Q96PY6 1258 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 PIGSQ96S52 555 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 AGO3Q9H9G7 860 aaKnown RBP15.36■□□□□ 0.05
CTSA-212ENST00000606394 AAASQ9NRG9 546 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 FAM86C1Q9NVL1 165 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
CTSA-212ENST00000606394 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 DCHS1Q96JQ0 3298 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 ZNF292O60281 2723 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 KIAA1671Q9BY89 1806 aa15.36■□□□□ 0.05
CTSA-212ENST00000606394 DOCK5Q9H7D0 1870 aa15.35■□□□□ 0.05
CTSA-212ENST00000606394 RRN3P2A6NIE6 340 aa15.35■□□□□ 0.05
CTSA-212ENST00000606394 SCG2P13521 617 aa15.35■□□□□ 0.05
CTSA-212ENST00000606394 CD52P31358 61 aa15.35■□□□□ 0.05
CTSA-212ENST00000606394 MARCH8Q5T0T0 291 aa15.35■□□□□ 0.05
CTSA-212ENST00000606394 TMEM184AQ6ZMB5 413 aa15.35■□□□□ 0.05
CTSA-212ENST00000606394 RTN4RL1Q86UN2 441 aaPredicted RBP15.35■□□□□ 0.05
CTSA-212ENST00000606394 SEPT1Q8WYJ6 367 aa15.35■□□□□ 0.05
CTSA-212ENST00000606394 TNPO1Q92973 898 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms