RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 MMP19Q99542 508 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 C19orf73Q9NVV2 129 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 FANCLQ9NW38 375 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 CLEC1BQ9P126 229 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 CD163L1Q9NR16 1453 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 KIAA1210Q9ULL0 1709 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 TNRC6CQ9HCJ0 1690 aaKnown RBP6.07□□□□□ -1.44
VRK3-222ENST00000601324 USP47Q96K76 1375 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 SBNO2Q9Y2G9 1366 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 A0A0G2JLW4 131 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 FITM1A5D6W6 292 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 MEFVO15553 781 aaPredicted RBP6.07□□□□□ -1.44
VRK3-222ENST00000601324 CDC45O75419 566 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 KCNAB2Q13303 367 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 IQCEQ6IPM2 695 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 SPPL2CQ8IUH8 684 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 OXR1Q8N573 874 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 ABHD8Q96I13 439 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 RC3H2Q9HBD1 1191 aaKnown RBP6.07□□□□□ -1.44
VRK3-222ENST00000601324 CTNND2Q9UQB3 1225 aa6.07□□□□□ -1.44
VRK3-222ENST00000601324 N4BP2Q86UW6 1770 aaPredicted RBP6.07□□□□□ -1.44
VRK3-222ENST00000601324 KAT6BQ8WYB5 2073 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 PALLDQ8WX93 1383 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 ARFGEF1Q9Y6D6 1849 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 CENPJQ9HC77 1338 aaPredicted RBP6.06□□□□□ -1.44
VRK3-222ENST00000601324 A0A1W2PQ45 241 aaPredicted RBP6.06□□□□□ -1.44
VRK3-222ENST00000601324 A0A1W2PQY0 241 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 USP2O75604 605 aaPredicted RBP6.06□□□□□ -1.44
VRK3-222ENST00000601324 HPXP02790 462 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 MMP10P09238 476 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 DPEP1P16444 411 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 HSD3B2P26439 372 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 LTBRP36941 435 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 RTP1P59025 263 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 LAPTM5Q13571 262 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 NR0B2Q15466 257 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 NTRK3Q16288 839 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 C16orf86Q6ZW13 317 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 USP53Q70EK8 1073 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 CCDC103Q8IW40 242 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 SYNPOQ8N3V7 929 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 DCAF4Q8WV16 495 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 IP6K1Q92551 441 aa6.06□□□□□ -1.44
VRK3-222ENST00000601324 TMEFF2Q9UIK5 374 aaPredicted RBP6.06□□□□□ -1.44
VRK3-222ENST00000601324 OAS3Q9Y6K5 1087 aaKnown RBP6.06□□□□□ -1.44
VRK3-222ENST00000601324 SBF1O95248 1867 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 BLACEA4D250 179 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 ARNTLO00327 626 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 C6orf222P0C671 652 aaPredicted RBP6.05□□□□□ -1.44
VRK3-222ENST00000601324 RAC2P15153 192 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 GABREP78334 506 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 RBM10P98175 930 aaKnown RBP6.05□□□□□ -1.44
VRK3-222ENST00000601324 MBLAC2Q68D91 279 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 RSPO2Q6UXX9 243 aaPredicted RBP6.05□□□□□ -1.44
VRK3-222ENST00000601324 CEP128Q6ZU80 1094 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 CBLL1Q75N03 491 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 CPNE8Q86YQ8 564 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 JAMLQ86YT9 394 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 C16orf71Q8IYS4 520 aaPredicted RBP6.05□□□□□ -1.44
VRK3-222ENST00000601324 ZCRB1Q8TBF4 217 aaKnown RBP6.05□□□□□ -1.44
VRK3-222ENST00000601324 DIO2Q92813 273 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 SP110Q9HB58 689 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 NCOA5Q9HCD5 579 aaKnown RBP6.05□□□□□ -1.44
VRK3-222ENST00000601324 NPFFR2Q9Y5X5 522 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 MON2Q7Z3U7 1717 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 CNTNAP1P78357 1384 aa6.05□□□□□ -1.44
VRK3-222ENST00000601324 LTN1O94822 1766 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 GLTPD2A6NH11 291 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 WTIPA6NIX2 430 aaPredicted RBP6.04□□□□□ -1.44
VRK3-222ENST00000601324 NOTOA8MTQ0 251 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 NRDCO43847 1150 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 ASMTLO95671 621 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 ERVFC1P60507 584 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 ITPK1Q13572 414 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 TCEA2Q15560 299 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 SLC14A2Q15849 920 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 HSF5Q4G112 596 aaPredicted RBP6.04□□□□□ -1.44
VRK3-222ENST00000601324 PLEKHG4Q58EX7 1191 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 STYK1Q6J9G0 422 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 GALNT18Q6P9A2 607 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 MAMDC2Q7Z304 686 aaPredicted RBP6.04□□□□□ -1.44
VRK3-222ENST00000601324 NBPF11Q86T75 865 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 NME9Q86XW9 330 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 LILRA2Q8N149 483 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 MYLIPQ8WY64 445 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 PTPRN2Q92932 1015 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 JMJD8Q96S16 334 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 MRPL4Q9BYD3 311 aaKnown RBP6.04□□□□□ -1.44
VRK3-222ENST00000601324 GPR27Q9NS67 375 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 RNF181Q9P0P0 153 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 TAF6LQ9Y6J9 622 aa6.04□□□□□ -1.44
VRK3-222ENST00000601324 C7orf72A4D263 438 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 PLD2O14939 933 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 PPP1R12AO14974 1030 aaPredicted RBP6.03□□□□□ -1.44
VRK3-222ENST00000601324 CYP27B1O15528 508 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 NPHS1O60500 1241 aa6.03□□□□□ -1.44
VRK3-222ENST00000601324 HSPA8P11142 646 aaKnown RBP6.03□□□□□ -1.44
VRK3-222ENST00000601324 VEGFAP15692 232 aaPredicted RBP6.03□□□□□ -1.44
VRK3-222ENST00000601324 CTCFP49711 727 aaPredicted RBP6.03□□□□□ -1.44
VRK3-222ENST00000601324 CORO7P57737 925 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms