RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 POLR3CQ9BUI4 534 aaPredicted RBP22.94■■□□□ 1.26
PNKP-215ENST00000600910 UPF3AQ9H1J1 476 aaKnown RBP22.94■■□□□ 1.26
PNKP-215ENST00000600910 SPC25Q9HBM1 224 aa22.94■■□□□ 1.26
PNKP-215ENST00000600910 GABBR1Q9UBS5 961 aa22.94■■□□□ 1.26
PNKP-215ENST00000600910 POTEB3A0JP26 581 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 MYADML2A6NDP7 307 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 DDX11L8A8MPP1 907 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 CTAGE5O15320 804 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 BEX3Q00994 111 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 ECM1Q16610 540 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 FSCN1Q16658 493 aaKnown RBP22.93■■□□□ 1.26
PNKP-215ENST00000600910 UGCGQ16739 394 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 UTP14CQ5TAP6 766 aaKnown RBP22.93■■□□□ 1.26
PNKP-215ENST00000600910 LHX8Q68G74 356 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 POTEBQ6S5H4 581 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 TPH2Q8IWU9 490 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 ARMC5Q96C12 935 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 CALML4Q96GE6 196 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 PCYT2Q99447 389 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 LXNQ9BS40 222 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 PANK2Q9BZ23 570 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 TUFT1Q9NNX1 390 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 PAK6Q9NQU5 681 aaPredicted RBP22.93■■□□□ 1.26
PNKP-215ENST00000600910 ZNF302Q9NR11 478 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 KDM3AQ9Y4C1 1321 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 ADAMTS4O75173 837 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 PPFIA4O75335 1185 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 HOXD8P13378 290 aaPredicted RBP22.93■■□□□ 1.26
PNKP-215ENST00000600910 QARSP47897 775 aaKnown RBP22.93■■□□□ 1.26
PNKP-215ENST00000600910 NDUFA8P51970 172 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 DGKDQ16760 1214 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 BRDTQ58F21 947 aaPredicted RBP22.93■■□□□ 1.26
PNKP-215ENST00000600910 PDILTQ8N807 584 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 CDK5RAP3Q96JB5 506 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 PLIN2Q99541 437 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 RNF208Q9H0X6 261 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 WRAP73Q9P2S5 460 aaPredicted RBP22.93■■□□□ 1.26
PNKP-215ENST00000600910 CCDC39Q9UFE4 941 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 KCNH3Q9ULD8 1083 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 HPSEQ9Y251 543 aa22.93■■□□□ 1.26
PNKP-215ENST00000600910 A0A087X0B3 334 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 FAM237AA0A1B0GTK4 181 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 LGR5O75473 907 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 PSMC5P62195 406 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 NKX3-2P78367 333 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 GRB10Q13322 594 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 HYIQ5T013 277 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 FAM160B1Q5W0V3 765 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 POTEGQ6S5H5 508 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 TRIM50Q86XT4 487 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 PNMA5Q96PV4 448 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 AZI2Q9H6S1 392 aa22.92■■□□□ 1.26
PNKP-215ENST00000600910 MAFBQ9Y5Q3 323 aaPredicted RBP22.92■■□□□ 1.26
PNKP-215ENST00000600910 EMSYQ7Z589 1322 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 IGSF9BQ9UPX0 1349 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 WDR81Q562E7 1941 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 SLC26A4O43511 780 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 LGALS2P05162 132 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 STAT5BP51692 787 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 GNASQ5JWF2 1037 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 CCDC73Q6ZRK6 1079 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 AFAP1L1Q8TED9 768 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 GLG1Q92896 1179 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 ATP6V0A1Q93050 837 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 MCOLN1Q9GZU1 580 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 NT5C3AQ9H0P0 336 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 ZSWIM4Q9H7M6 989 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 DDX19AQ9NUU7 478 aaKnown RBP22.91■■□□□ 1.26
PNKP-215ENST00000600910 KIAA1024Q9UPX6 916 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 FRMPD3Q5JV73 1810 aa22.91■■□□□ 1.26
PNKP-215ENST00000600910 POLR2DO15514 142 aaKnown RBP22.9■■□□□ 1.26
PNKP-215ENST00000600910 MYCNP04198 464 aaPredicted RBP22.9■■□□□ 1.26
PNKP-215ENST00000600910 ZNF286BP0CG31 522 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 LIG1P18858 919 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 PLCG1P19174 1290 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 TMEM119Q4V9L6 283 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 PDXDC2PQ6P474 469 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 DEFB118Q96PH6 123 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 ZNF862O60290 1169 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 MUTP22033 750 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 SYKP43405 635 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 NFKBIBQ15653 356 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 KLHDC9Q8NEP7 349 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 C16orf70Q9BSU1 422 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 SMARCAD1Q9H4L7 1026 aa22.9■■□□□ 1.26
PNKP-215ENST00000600910 DKC1O60832 514 aaKnown RBP eCLIP22.89■■□□□ 1.25
PNKP-215ENST00000600910 MYL3P08590 195 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 CST5P28325 142 aaPredicted RBP22.89■■□□□ 1.25
PNKP-215ENST00000600910 FAM160A1Q05DH4 1040 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 RRAGBQ5VZM2 374 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 PLPPR4Q7Z2D5 763 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 TRMT1LQ7Z2T5 733 aaKnown RBP22.89■■□□□ 1.25
PNKP-215ENST00000600910 KCNK18Q7Z418 384 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 RNF180Q86T96 592 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 C4orf19Q8IY42 314 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 DHX58Q96C10 678 aa22.89■■□□□ 1.25
PNKP-215ENST00000600910 MYH9P35579 1960 aaKnown RBP22.88■■□□□ 1.25
PNKP-215ENST00000600910 A0A087WWV3 80 aa22.88■■□□□ 1.25
PNKP-215ENST00000600910 NR1I2O75469 434 aa22.88■■□□□ 1.25
PNKP-215ENST00000600910 ATP4AP20648 1035 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms