RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 SEMA3FQ13275 785 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 MICAL1Q8TDZ2 1067 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 PPP2R3CQ969Q6 453 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 ZNF689Q96CS4 500 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-219ENST00000600879 PIGSQ96S52 555 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 PLVAPQ9BX97 442 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 TLE6Q9H808 572 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 EHMT1Q9H9B1 1298 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 AGO3Q9H9G7 860 aaKnown RBP11.52□□□□□ -0.57
HIF3A-219ENST00000600879 ZSWIM5Q9P217 1185 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-219ENST00000600879 DOCK5Q9H7D0 1870 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 GALR2O43603 387 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-219ENST00000600879 ICAM3P32942 547 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 ID4P47928 161 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 PDE1AP54750 535 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 IGBP1P78318 339 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 MGAT3Q09327 533 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 SLC35G1Q2M3R5 365 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 GNPTABQ3T906 1256 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 CCDC178Q5BJE1 867 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 FBXO47Q5MNV8 452 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 LLGL2Q6P1M3 1020 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 METTL7BQ6UX53 244 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 RTN4RL1Q86UN2 441 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-219ENST00000600879 DNAJB3Q8WWF6 145 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 PIBF1Q8WXW3 757 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 RIPOR3Q96MK2 946 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 FAM49AQ9H0Q0 323 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-219ENST00000600879 CDY2AQ9Y6F7 541 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 DMDP11532 3685 aa11.51□□□□□ -0.57
HIF3A-219ENST00000600879 MED19A0JLT2 244 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-219ENST00000600879 SPATA31C2B4DYI2 1134 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 TMEM62Q0P6H9 643 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 APOBRQ0VD83 1088 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 NEDD9Q14511 834 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 IFIT1BQ5T764 474 aaKnown RBP11.5□□□□□ -0.57
HIF3A-219ENST00000600879 CMTR2Q8IYT2 770 aaKnown RBP11.5□□□□□ -0.57
HIF3A-219ENST00000600879 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 KREMEN2Q8NCW0 462 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 P2RX5Q93086 422 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 MTMR8Q96EF0 704 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 UBAC1Q9BSL1 405 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 RWDD1Q9H446 243 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-219ENST00000600879 MAP3K20Q9NYL2 800 aaKnown RBP11.5□□□□□ -0.57
HIF3A-219ENST00000600879 PKD2L1Q9P0L9 805 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 MAD2L2Q9UI95 211 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 KIAA1671Q9BY89 1806 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 NRCAMQ92823 1304 aa11.5□□□□□ -0.57
HIF3A-219ENST00000600879 CACNA1HO95180 2353 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 PROB1E7EW31 1015 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 FIBPO43427 364 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 BRD1O95696 1058 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 TCF7P36402 384 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-219ENST00000600879 ERVFC1P60507 584 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 HDAC1Q13547 482 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-219ENST00000600879 GRIK4Q16099 956 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 SPOUT1Q5T280 376 aaKnown RBP11.49□□□□□ -0.57
HIF3A-219ENST00000600879 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 RSPH3Q86UC2 560 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 SUSD6Q92537 303 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 INPP4AQ96PE3 977 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-219ENST00000600879 PPP4R2Q9NY27 417 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 TUBE1Q9UJT0 475 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 VPS13AQ96RL7 3174 aa11.49□□□□□ -0.57
HIF3A-219ENST00000600879 PTPRZ1P23471 2315 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-219ENST00000600879 KRT37O76014 449 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 ASGR2P07307 311 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 WEE2P0C1S8 567 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 SDSP20132 328 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 NBL1P41271 181 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 TECP42680 631 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 MFAP1P55081 439 aaKnown RBP11.48□□□□□ -0.57
HIF3A-219ENST00000600879 MRPS6P82932 125 aaKnown RBP11.48□□□□□ -0.57
HIF3A-219ENST00000600879 CWC27Q6UX04 472 aaKnown RBP11.48□□□□□ -0.57
HIF3A-219ENST00000600879 NPAS4Q8IUM7 802 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 ATP8B4Q8TF62 1192 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 CCDC136Q96JN2 1154 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 LRFN2Q9ULH4 789 aa11.48□□□□□ -0.57
HIF3A-219ENST00000600879 LAMA4Q16363 1823 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 PALM3A6NDB9 673 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-219ENST00000600879 ATP9AO75110 1047 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 IGHDP01880 384 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 SCG2P13521 617 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 NAALADL2Q58DX5 795 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 MARCH8Q5T0T0 291 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 PLPP4Q5VZY2 271 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 SYCE2Q6PIF2 218 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 USP17L6PQ6QN14 398 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 CYB5R4Q7L1T6 521 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 ERMP1Q7Z2K6 904 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 CRIPAKQ8N1N5 446 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 FEZF2Q8TBJ5 459 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 GLG1Q92896 1179 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 NKD2Q969F2 451 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-219ENST00000600879 NEK1Q96PY6 1258 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms