RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 YEATS4O95619 227 aa18.76■□□□□ 0.59
USHBP1-210ENST00000600286 CCNE2O96020 404 aa18.76■□□□□ 0.59
USHBP1-210ENST00000600286 NASPP49321 788 aaPredicted RBP18.76■□□□□ 0.59
USHBP1-210ENST00000600286 IRX5P78411 483 aaPredicted RBP18.76■□□□□ 0.59
USHBP1-210ENST00000600286 SLC39A14Q15043 492 aa18.76■□□□□ 0.59
USHBP1-210ENST00000600286 NEK9Q8TD19 979 aa18.76■□□□□ 0.59
USHBP1-210ENST00000600286 KCNG4Q8TDN1 519 aa18.76■□□□□ 0.59
USHBP1-210ENST00000600286 PAWRQ96IZ0 340 aaKnown RBP18.76■□□□□ 0.59
USHBP1-210ENST00000600286 VAV3Q9UKW4 847 aa18.76■□□□□ 0.59
USHBP1-210ENST00000600286 LAMA3Q16787 3333 aa18.76■□□□□ 0.59
USHBP1-210ENST00000600286 A0A0U1RQG5 324 aaPredicted RBP18.75■□□□□ 0.59
USHBP1-210ENST00000600286 VWA3AA6NCI4 1184 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 SPTLC2O15270 562 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 LGR5O75473 907 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 P4HBP07237 508 aaKnown RBP18.75■□□□□ 0.59
USHBP1-210ENST00000600286 ZNF286BP0CG31 522 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 PSEN2P49810 448 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 MNX1P50219 401 aaPredicted RBP18.75■□□□□ 0.59
USHBP1-210ENST00000600286 DNM1Q05193 864 aaKnown RBP18.75■□□□□ 0.59
USHBP1-210ENST00000600286 KRT79Q5XKE5 535 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 HAUS3Q68CZ6 603 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 C7orf31Q8N865 590 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 FAM167AQ96KS9 214 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 AK8Q96MA6 479 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 SCAND2PQ9GZW5 306 aaPredicted RBP18.75■□□□□ 0.59
USHBP1-210ENST00000600286 NRBP2Q9NSY0 501 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 GABBR1Q9UBS5 961 aa18.75■□□□□ 0.59
USHBP1-210ENST00000600286 EMSYQ7Z589 1322 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 H0YGN5 161 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 GNAT1P11488 350 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 LONP1P36776 959 aaKnown RBP18.74■□□□□ 0.59
USHBP1-210ENST00000600286 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
USHBP1-210ENST00000600286 PSMC5P62195 406 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 MFSD10Q14728 455 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 KIAA0753Q2KHM9 967 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 B3GNT9Q6UX72 402 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
USHBP1-210ENST00000600286 LINC00301Q8NCQ3 95 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 AFAP1L1Q8TED9 768 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 C16orf70Q9BSU1 422 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 PRO3102Q9H379 93 aa18.74■□□□□ 0.59
USHBP1-210ENST00000600286 SRPRBQ9Y5M8 271 aaKnown RBP18.74■□□□□ 0.59
USHBP1-210ENST00000600286 MORC2Q9Y6X9 1032 aaPredicted RBP18.74■□□□□ 0.59
USHBP1-210ENST00000600286 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 PPP6R2O75170 966 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 F2P00734 622 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 MARCKSP29966 332 aaPredicted RBP18.73■□□□□ 0.59
USHBP1-210ENST00000600286 TXLNAP40222 546 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 PTPN11Q06124 597 aaPredicted RBP18.73■□□□□ 0.59
USHBP1-210ENST00000600286 ITGA7Q13683 1181 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 PTPAQ15257 358 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 FAM47CQ5HY64 1035 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 SPATA32Q96LK8 384 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 EIF2AK1Q9BQI3 630 aaKnown RBP18.73■□□□□ 0.59
USHBP1-210ENST00000600286 HTATIP2Q9BUP3 242 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 FTOQ9C0B1 505 aaKnown RBP eCLIP18.73■□□□□ 0.59
USHBP1-210ENST00000600286 ZSWIM4Q9H7M6 989 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 TRPC6Q9Y210 931 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 COLQQ9Y215 455 aaPredicted RBP18.73■□□□□ 0.59
USHBP1-210ENST00000600286 MROH7Q68CQ1 1323 aa18.73■□□□□ 0.59
USHBP1-210ENST00000600286 POTEMA6NI47 508 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 EML1O00423 815 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 TLR3O15455 904 aaKnown RBP18.72■□□□□ 0.59
USHBP1-210ENST00000600286 UBA7P41226 1012 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 ME1P48163 572 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 CSPP1Q1MSJ5 1256 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 NBPF20Q3BBV1 942 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 SLC39A5Q6ZMH5 540 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 OTUD6AQ7L8S5 288 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 CCDC60Q8IWA6 550 aaPredicted RBP18.72■□□□□ 0.59
USHBP1-210ENST00000600286 TPH2Q8IWU9 490 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 IGSF22Q8N9C0 903 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 RASSF8Q8NHQ8 419 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 CDK5RAP3Q96JB5 506 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 TUFT1Q9NNX1 390 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 MAFBQ9Y5Q3 323 aaPredicted RBP18.72■□□□□ 0.59
USHBP1-210ENST00000600286 TRIOBPQ9H2D6 2365 aa18.72■□□□□ 0.59
USHBP1-210ENST00000600286 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 RRN3P2A6NIE6 340 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 ARVCFO00192 962 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 HBP1O60381 514 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 COL6A1P12109 1028 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 MUTP22033 750 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 MARK3P27448 753 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 CCT6AP40227 531 aaKnown RBP18.71■□□□□ 0.59
USHBP1-210ENST00000600286 ATN1P54259 1190 aaPredicted RBP18.71■□□□□ 0.59
USHBP1-210ENST00000600286 PSMC6P62333 389 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 SPIRE1Q08AE8 756 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 XKR3Q5GH77 459 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 TRIM50Q86XT4 487 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 SNX29Q8TEQ0 813 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 DIS3LQ8TF46 1054 aaKnown RBP18.71■□□□□ 0.59
USHBP1-210ENST00000600286 BBXQ8WY36 941 aaPredicted RBP18.71■□□□□ 0.59
USHBP1-210ENST00000600286 KAT2BQ92831 832 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 CALML4Q96GE6 196 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 DYDC2Q96IM9 177 aa18.71■□□□□ 0.59
USHBP1-210ENST00000600286 CCDC43Q96MW1 224 aaKnown RBP18.71■□□□□ 0.59
USHBP1-210ENST00000600286 POLR3CQ9BUI4 534 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms