RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 GOPCQ9HD26 462 aa25.03■■□□□ 1.6
SRRM1-222ENST00000596378 SALL4Q9UJQ4 1053 aa25.03■■□□□ 1.6
SRRM1-222ENST00000596378 SFI1A8K8P3 1242 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 PDE2AO00408 941 aaPredicted RBP25.02■■□□□ 1.6
SRRM1-222ENST00000596378 ZBTB39O15060 712 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 UBXN6Q9BZV1 441 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 ZCCHC17Q9NP64 241 aaKnown RBP25.02■■□□□ 1.6
SRRM1-222ENST00000596378 FBXO28Q9NVF7 368 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 STK32BQ9NY57 414 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 CETN3O15182 167 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 MAGEA1P43355 309 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 SMC1AQ14683 1233 aaKnown RBP25.02■■□□□ 1.6
SRRM1-222ENST00000596378 EDRF1Q3B7T1 1238 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 RABGAP1Q9Y3P9 1069 aa25.02■■□□□ 1.6
SRRM1-222ENST00000596378 VIL1P09327 827 aaKnown RBP25.01■■□□□ 1.59
SRRM1-222ENST00000596378 ARID5AQ03989 594 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 KCNA1Q09470 495 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 KCNH2Q12809 1159 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 KNOP1Q1ED39 458 aaKnown RBP25.01■■□□□ 1.59
SRRM1-222ENST00000596378 EPM2AIP1Q7L775 607 aaPredicted RBP25.01■■□□□ 1.59
SRRM1-222ENST00000596378 HNRNPLLQ8WVV9 542 aaKnown RBP25.01■■□□□ 1.59
SRRM1-222ENST00000596378 ANO9A1A5B4 782 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 OAS2P29728 719 aaKnown RBP25.01■■□□□ 1.59
SRRM1-222ENST00000596378 TUBB4BP68371 445 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 RASSF7Q02833 373 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 ENOX2Q16206 610 aaKnown RBP25.01■■□□□ 1.59
SRRM1-222ENST00000596378 SPDYE2Q495Y8 402 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 SFMBT2Q5VUG0 894 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 OGFOD1Q8N543 542 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 TTLL6Q8N841 843 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 EDEM3Q9BZQ6 932 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 IKZF4Q9H2S9 585 aa25.01■■□□□ 1.59
SRRM1-222ENST00000596378 EPS15P42566 896 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 TPH2Q8IWU9 490 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 CAGE1Q8TC20 777 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 POLR3CQ9BUI4 534 aaPredicted RBP25■■□□□ 1.59
SRRM1-222ENST00000596378 HDAC9Q9UKV0 1011 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 GCOM1H8Y6P7 765 aaPredicted RBP25■■□□□ 1.59
SRRM1-222ENST00000596378 MAP2K7O14733 419 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 POLR2MP0CAP2 368 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 ACTN1P12814 892 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 LRCH2Q5VUJ6 765 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 PPP4R3CPQ6ZMV5 832 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 OTOP1Q7RTM1 612 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 TRIM58Q8NG06 486 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 DYDC2Q96IM9 177 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 RANBP17Q9H2T7 1088 aaKnown RBP25■■□□□ 1.59
SRRM1-222ENST00000596378 SYNPO2Q9UMS6 1093 aa25■■□□□ 1.59
SRRM1-222ENST00000596378 TACC1O75410 805 aa24.99■■□□□ 1.59
SRRM1-222ENST00000596378 EYA4O95677 639 aa24.99■■□□□ 1.59
SRRM1-222ENST00000596378 RAPGEF1Q13905 1077 aa24.99■■□□□ 1.59
SRRM1-222ENST00000596378 PSMB7Q99436 277 aa24.99■■□□□ 1.59
SRRM1-222ENST00000596378 TRAF3IP3Q9Y228 551 aa24.99■■□□□ 1.59
SRRM1-222ENST00000596378 RGPD3A6NKT7 1758 aaPredicted RBP24.99■■□□□ 1.59
SRRM1-222ENST00000596378 RGPD4Q7Z3J3 1758 aa24.99■■□□□ 1.59
SRRM1-222ENST00000596378 TBCAO75347 108 aaKnown RBP24.98■■□□□ 1.59
SRRM1-222ENST00000596378 ERLIN1O75477 346 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 GCNT3O95395 438 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 MAPK8IP2Q13387 824 aaPredicted RBP24.98■■□□□ 1.59
SRRM1-222ENST00000596378 CAMKK2Q96RR4 588 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 HSD17B14Q9BPX1 270 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 VCPKMTQ9H867 229 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 ASTN1O14525 1302 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 ATAD5Q96QE3 1844 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 BUB1O43683 1085 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 SLITRK3O94933 977 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 USP14P54578 494 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 SLC9C1Q4G0N8 1177 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 RINT1Q6NUQ1 792 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 FAM184BQ9ULE4 1060 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 L1RE1Q9UN81 338 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 JRKLQ9Y4A0 524 aa24.98■■□□□ 1.59
SRRM1-222ENST00000596378 SSU72P8A0A1W2PR75 194 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 H3BQF6 201 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 CLIC2O15247 247 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 PSMD10O75832 226 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 C2orf54Q08AI8 447 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 FAM133AQ8N9E0 248 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 COG1Q8WTW3 980 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 GANQ9H2C0 597 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 SNX12Q9UMY4 172 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 RBBP6Q7Z6E9 1792 aaKnown RBP24.97■■□□□ 1.59
SRRM1-222ENST00000596378 NCK2O43639 380 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 AKAP3O75969 853 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 SERPING1P05155 500 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 SLC9A1P19634 815 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 CASP4P49662 377 aa24.97■■□□□ 1.59
SRRM1-222ENST00000596378 ARMCX3Q9UH62 379 aaPredicted RBP24.97■■□□□ 1.59
SRRM1-222ENST00000596378 ZMYND10O75800 440 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 CKAP4Q07065 602 aaKnown RBP24.96■■□□□ 1.59
SRRM1-222ENST00000596378 DCAF17Q5H9S7 520 aaPredicted RBP24.96■■□□□ 1.59
SRRM1-222ENST00000596378 NFRKBQ6P4R8 1299 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 RTKN2Q8IZC4 609 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 CHURC1Q8WUH1 139 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 WRAP73Q9P2S5 460 aaPredicted RBP24.96■■□□□ 1.59
SRRM1-222ENST00000596378 STK24Q9Y6E0 443 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 ARP10275 920 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 DPEP1P16444 411 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 CXCR5P32302 372 aa24.96■■□□□ 1.59
SRRM1-222ENST00000596378 SLC5A5Q92911 643 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms