RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ARP10275 920 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 CCND2P30279 289 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 CD52P31358 61 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 NUBP1P53384 320 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 ERVFC1P60507 584 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 FCHSD1Q86WN1 690 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 CMTR2Q8IYT2 770 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 DNAJB3Q8WWF6 145 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 NKD2Q969F2 451 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-208ENST00000595726 NEDD4P46934 1319 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 MED19A0JLT2 244 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 GHRHRQ02643 423 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 SEMA3FQ13275 785 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 DGKHQ86XP1 1220 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 SMC5Q8IY18 1101 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 STAG2Q8N3U4 1231 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 NEK1Q96PY6 1258 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 AMNQ9BXJ7 453 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 KAT14Q9H8E8 782 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 RTEL1Q9NZ71 1219 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 CDY2AQ9Y6F7 541 aa15.94■□□□□ 0.14
SHKBP1-208ENST00000595726 A0A0D9SFI3 127 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 IGHDP01880 384 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 TECP42680 631 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 MRPS9P82933 396 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 DUSP6Q16828 381 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 ASPRV1Q53RT3 343 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 SYCE2Q6PIF2 218 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 METTL7BQ6UX53 244 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 ZNF589Q86UQ0 364 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 NPAS4Q8IUM7 802 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 RWDD1Q9H446 243 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 HELLSQ9NRZ9 838 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 NRCAMQ92823 1304 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 CACNA1BQ00975 2339 aa15.93■□□□□ 0.14
SHKBP1-208ENST00000595726 SPATA31C2B4DYI2 1134 aa15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 KRT37O76014 449 aa15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 LLGL2Q6P1M3 1020 aa15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 TSHZ1Q6ZSZ6 1077 aa15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 ESR2Q92731 530 aa15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 HCSTQ9UBK5 93 aa15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-208ENST00000595726 KIAA1671Q9BY89 1806 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 PLXNA4Q9HCM2 1894 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 TRIM6-TRIM34B2RNG4 842 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 MARK3P27448 753 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 PDE1AP54750 535 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 APOBRQ0VD83 1088 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 NEDD9Q14511 834 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 MCMDC2Q4G0Z9 681 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 MARCH8Q5T0T0 291 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 SPOUT1Q5T280 376 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 ASTLQ6HA08 431 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 ANKRD54Q6NXT1 300 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 TAF2Q6P1X5 1199 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 LNPKQ9C0E8 428 aa15.91■□□□□ 0.14
SHKBP1-208ENST00000595726 MYO10Q9HD67 2058 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 C2CD4DB7Z1M9 353 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 GCOM1H8Y6P7 765 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 FGF18O76093 207 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 ASGR2P07307 311 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 POLR2MP0CAP2 368 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 IGBP1P78318 339 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 TMEM62Q0P6H9 643 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 PPFIA1Q13136 1202 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 MTMR3Q13615 1198 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 KCNC3Q14003 757 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 RSPH3Q86UC2 560 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 ENAHQ8N8S7 591 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 RMDN1Q96DB5 314 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 INPP4AQ96PE3 977 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 FAM49AQ9H0Q0 323 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 TMEM260Q9NX78 707 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 PADI3Q9ULW8 664 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 SORCS3Q9UPU3 1222 aa15.9■□□□□ 0.14
SHKBP1-208ENST00000595726 ZFHX4Q86UP3 3567 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 DOCK5Q9H7D0 1870 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 STAG3L1P0CL83 205 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 SCG2P13521 617 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 MRPS6P82932 125 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 GRIK4Q16099 956 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 SLC35G1Q2M3R5 365 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 GNPTABQ3T906 1256 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 PLPP4Q5VZY2 271 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 B4GALNT3Q6L9W6 998 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 TMEM184AQ6ZMB5 413 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 HOMER1Q86YM7 354 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 UBALD2Q8IYN6 164 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 EVI5LQ96CN4 794 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 ZSCAN10Q96SZ4 725 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 TMX1Q9H3N1 280 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 PCDHB12Q9Y5F1 795 aa15.89■□□□□ 0.13
SHKBP1-208ENST00000595726 KMT2BQ9UMN6 2715 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms