RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 STX1AQ16623 288 aa15.08■□□□□ 0
VMP1-217ENST00000593168 GNPTABQ3T906 1256 aa15.08■□□□□ 0
VMP1-217ENST00000593168 WDR78Q5VTH9 848 aa15.08■□□□□ 0
VMP1-217ENST00000593168 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0
VMP1-217ENST00000593168 SOCS4Q8WXH5 440 aa15.08■□□□□ 0
VMP1-217ENST00000593168 POLR3CQ9BUI4 534 aaPredicted RBP15.08■□□□□ 0
VMP1-217ENST00000593168 ANO10Q9NW15 660 aa15.08■□□□□ 0
VMP1-217ENST00000593168 ASTN1O14525 1302 aa15.08■□□□□ 0
VMP1-217ENST00000593168 DNAH12Q6ZR08 3092 aa15.07■□□□□ 0
VMP1-217ENST00000593168 SPATA31C2B4DYI2 1134 aa15.07■□□□□ 0
VMP1-217ENST00000593168 EML1O00423 815 aa15.07■□□□□ 0
VMP1-217ENST00000593168 MUTP22033 750 aa15.07■□□□□ 0
VMP1-217ENST00000593168 MAPK4P31152 587 aa15.07■□□□□ 0
VMP1-217ENST00000593168 AFMP43652 599 aa15.07■□□□□ 0
VMP1-217ENST00000593168 MRE11P49959 708 aa15.07■□□□□ 0
VMP1-217ENST00000593168 NLRP12P59046 1061 aa15.07■□□□□ 0
VMP1-217ENST00000593168 DPYDQ12882 1025 aa15.07■□□□□ 0
VMP1-217ENST00000593168 EPHA7Q15375 998 aa15.07■□□□□ 0
VMP1-217ENST00000593168 MORN1Q5T089 497 aa15.07■□□□□ 0
VMP1-217ENST00000593168 GPR142Q7Z601 462 aa15.07■□□□□ 0
VMP1-217ENST00000593168 TRMT44Q8IYL2 757 aaKnown RBP15.07■□□□□ 0
VMP1-217ENST00000593168 TRIML1Q8N9V2 468 aa15.07■□□□□ 0
VMP1-217ENST00000593168 ERCC4Q92889 916 aaPredicted RBP15.07■□□□□ 0
VMP1-217ENST00000593168 SMARCE1Q969G3 411 aa15.07■□□□□ 0
VMP1-217ENST00000593168 PLIN2Q99541 437 aa15.07■□□□□ 0
VMP1-217ENST00000593168 MTRQ99707 1265 aa15.07■□□□□ 0
VMP1-217ENST00000593168 HSD17B14Q9BPX1 270 aa15.07■□□□□ 0
VMP1-217ENST00000593168 RBSNQ9H1K0 784 aa15.07■□□□□ 0
VMP1-217ENST00000593168 ZNFX1Q9P2E3 1918 aaKnown RBP15.07■□□□□ 0
VMP1-217ENST00000593168 MED24O75448 989 aa15.06■□□□□ 0
VMP1-217ENST00000593168 RGS20O76081 388 aa15.06■□□□□ 0
VMP1-217ENST00000593168 PGK2P07205 417 aa15.06■□□□□ 0
VMP1-217ENST00000593168 PRR29P0C7W0 189 aa15.06■□□□□ 0
VMP1-217ENST00000593168 SPATA31C1P0DKV0 1188 aa15.06■□□□□ 0
VMP1-217ENST00000593168 RGS2P41220 211 aa15.06■□□□□ 0
VMP1-217ENST00000593168 AMPD3Q01432 767 aa15.06■□□□□ 0
VMP1-217ENST00000593168 PDE4DQ08499 809 aa15.06■□□□□ 0
VMP1-217ENST00000593168 SEMA3FQ13275 785 aa15.06■□□□□ 0
VMP1-217ENST00000593168 ITGB3BPQ13352 177 aaPredicted RBP15.06■□□□□ 0
VMP1-217ENST00000593168 CATSPER3Q86XQ3 398 aa15.06■□□□□ 0
VMP1-217ENST00000593168 GRAMD1CQ8IYS0 662 aa15.06■□□□□ 0
VMP1-217ENST00000593168 NEK9Q8TD19 979 aa15.06■□□□□ 0
VMP1-217ENST00000593168 MORC4Q8TE76 937 aa15.06■□□□□ 0
VMP1-217ENST00000593168 LRRC15Q8TF66 581 aa15.06■□□□□ 0
VMP1-217ENST00000593168 RAD54LQ92698 747 aa15.06■□□□□ 0
VMP1-217ENST00000593168 FGD4Q96M96 766 aa15.06■□□□□ 0
VMP1-217ENST00000593168 GSDMAQ96QA5 445 aa15.06■□□□□ 0
VMP1-217ENST00000593168 EIF2AK1Q9BQI3 630 aaKnown RBP15.06■□□□□ 0
VMP1-217ENST00000593168 COL25A1Q9BXS0 654 aaPredicted RBP15.06■□□□□ 0
VMP1-217ENST00000593168 LRRC27Q9C0I9 530 aa15.06■□□□□ 0
VMP1-217ENST00000593168 UNC45AQ9H3U1 944 aa15.06■□□□□ 0
VMP1-217ENST00000593168 TUFT1Q9NNX1 390 aa15.06■□□□□ 0
VMP1-217ENST00000593168 BLOC1S4Q9NUP1 217 aa15.06■□□□□ 0
VMP1-217ENST00000593168 IVNS1ABPQ9Y6Y0 642 aa15.06■□□□□ 0
VMP1-217ENST00000593168 NFASCO94856 1347 aa15.06■□□□□ 0
VMP1-217ENST00000593168 LTBP2Q14767 1821 aa15.06■□□□□ 0
VMP1-217ENST00000593168 LAMA2P24043 3122 aaKnown RBP15.05■□□□□ -0
VMP1-217ENST00000593168 ASB14A6NK59 587 aa15.05■□□□□ -0
VMP1-217ENST00000593168 ATP9AO75110 1047 aa15.05■□□□□ -0
VMP1-217ENST00000593168 KRT76Q01546 638 aa15.05■□□□□ -0
VMP1-217ENST00000593168 ECM1Q16610 540 aa15.05■□□□□ -0
VMP1-217ENST00000593168 ZNF792Q3KQV3 632 aa15.05■□□□□ -0
VMP1-217ENST00000593168 L1TD1Q5T7N2 865 aaKnown RBP15.05■□□□□ -0
VMP1-217ENST00000593168 SV2BQ7L1I2 683 aa15.05■□□□□ -0
VMP1-217ENST00000593168 PLEKHH3Q7Z736 793 aa15.05■□□□□ -0
VMP1-217ENST00000593168 ZNF467Q7Z7K2 595 aaPredicted RBP15.05■□□□□ -0
VMP1-217ENST00000593168 RDM1Q8NG50 284 aa15.05■□□□□ -0
VMP1-217ENST00000593168 LARP4BQ92615 738 aaKnown RBP15.05■□□□□ -0
VMP1-217ENST00000593168 STAMQ92783 540 aa15.05■□□□□ -0
VMP1-217ENST00000593168 GUCD1Q96NT3 240 aa15.05■□□□□ -0
VMP1-217ENST00000593168 APBA2Q99767 749 aa15.05■□□□□ -0
VMP1-217ENST00000593168 C7orf25Q9BPX7 421 aa15.05■□□□□ -0
VMP1-217ENST00000593168 GRPEL1Q9HAV7 217 aa15.05■□□□□ -0
VMP1-217ENST00000593168 MAN1B1Q9UKM7 699 aa15.05■□□□□ -0
VMP1-217ENST00000593168 KIAA1024Q9UPX6 916 aa15.05■□□□□ -0
VMP1-217ENST00000593168 DIS3Q9Y2L1 958 aaKnown RBP15.05■□□□□ -0
VMP1-217ENST00000593168 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.04■□□□□ -0
VMP1-217ENST00000593168 POTEB3A0JP26 581 aa15.04■□□□□ -0
VMP1-217ENST00000593168 SLITRK3O94933 977 aa15.04■□□□□ -0
VMP1-217ENST00000593168 TGFB3P10600 412 aa15.04■□□□□ -0
VMP1-217ENST00000593168 KCNA2P16389 499 aa15.04■□□□□ -0
VMP1-217ENST00000593168 ADORA2AP29274 412 aa15.04■□□□□ -0
VMP1-217ENST00000593168 SFNP31947 248 aa15.04■□□□□ -0
VMP1-217ENST00000593168 MORC3Q14149 939 aa15.04■□□□□ -0
VMP1-217ENST00000593168 GRB14Q14449 540 aa15.04■□□□□ -0
VMP1-217ENST00000593168 ANO6Q4KMQ2 910 aa15.04■□□□□ -0
VMP1-217ENST00000593168 POTEBQ6S5H4 581 aa15.04■□□□□ -0
VMP1-217ENST00000593168 MIER3Q7Z3K6 550 aa15.04■□□□□ -0
VMP1-217ENST00000593168 SENP7Q9BQF6 1050 aa15.04■□□□□ -0
VMP1-217ENST00000593168 FLRT1Q9NZU1 646 aa15.04■□□□□ -0
VMP1-217ENST00000593168 PKD2L1Q9P0L9 805 aa15.04■□□□□ -0
VMP1-217ENST00000593168 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
VMP1-217ENST00000593168 CHMP2AO43633 222 aa15.03■□□□□ -0
VMP1-217ENST00000593168 JAK3P52333 1124 aa15.03■□□□□ -0
VMP1-217ENST00000593168 CUL4BQ13620 913 aa15.03■□□□□ -0
VMP1-217ENST00000593168 MCM6Q14566 821 aa15.03■□□□□ -0
VMP1-217ENST00000593168 KCNB1Q14721 858 aa15.03■□□□□ -0
VMP1-217ENST00000593168 UVSSAQ2YD98 709 aa15.03■□□□□ -0
VMP1-217ENST00000593168 ZNF746Q6NUN9 644 aaPredicted RBP15.03■□□□□ -0
VMP1-217ENST00000593168 CNNM4Q6P4Q7 775 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms