RNA–Protein interactions for RNA: ENST00000593098.5

PIK3C3-215, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, human

TSL 2

Gene PIK3C3, Length 3,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIK3C3-215	ENST00000593098	MBNL3	Q9NUK0	354 aa	Known RBP	2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	MAPRE3	Q9UPY8	281 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	PLAA	Q9Y263	795 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	KDM2B	Q8NHM5	1336 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	TGM5	O43548	720 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	IGFBP6	P24592	240 aa	Predicted RBP	2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	GDNF	P39905	211 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	SEPT7	Q16181	437 aa	Known RBP	2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	FAM209A	Q5JX71	171 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	LBX2	Q6XYB7	198 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	NOSTRIN	Q8IVI9	506 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	FIBCD1	Q8N539	461 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	FERD3L	Q96RJ6	166 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	LGR4	Q9BXB1	951 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	CHMP4A	Q9BY43	222 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	COL4A3	Q01955	1670 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	IGSF1	Q8N6C5	1336 aa		2.56	□□□□□ -2
PIK3C3-215	ENST00000593098	GLTPD2	A6NH11	291 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	FAM155A	B1AL88	458 aa	Predicted RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098		H0Y8X5	98 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	MSC	O60682	206 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	THBD	P07204	575 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	GTF2F1	P35269	517 aa	Known RBP eCLIP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	SUMO1	P63165	101 aa	Known RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	TIGD5	Q53EQ6	642 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	COL23A1	Q86Y22	540 aa	Predicted RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	PTCHD1	Q96NR3	888 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	APBA2	Q99767	749 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	SLC52A2	Q9HAB3	445 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	RC3H2	Q9HBD1	1191 aa	Known RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	TCF7L1	Q9HCS4	588 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	BSDC1	Q9NW68	430 aa	Predicted RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	MINPP1	Q9UNW1	487 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	AP4E1	Q9UPM8	1137 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	PCDHB12	Q9Y5F1	795 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	RLF	Q13129	1914 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	HYAL3	O43820	417 aa	Predicted RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	DSG1	Q02413	1049 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	SFRP5	Q5T4F7	317 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	ARTN	Q5T4W7	220 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	ANAPC16	Q96DE5	110 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	MAP6	Q96JE9	813 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	MFSD14A	Q96MC6	490 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	MIPEP	Q99797	713 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	TNFRSF12A	Q9NP84	129 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	RPAP1	Q9BWH6	1393 aa	Predicted RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	SSB	P05455	408 aa	Known RBP eCLIP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	ETF1	P62495	437 aa	Known RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	PHC1	P78364	1004 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	NMI	Q13287	307 aa	Predicted RBP	2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	KRTAP19-1	Q8IUB9	90 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	ZSWIM2	Q8NEG5	633 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	CRTAC1	Q9NQ79	661 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	GFOD1	Q9NXC2	390 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	TELO2	Q9Y4R8	837 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	PTPRF	P10586	1907 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	ADGRF5	Q8IZF2	1346 aa		2.55	□□□□□ -2
PIK3C3-215	ENST00000593098	TRAV20	A0A0B4J274	112 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	RNASE1	P07998	156 aa	Known RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	RAG1	P15918	1043 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	GLB1	P16278	677 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	MCM4	P33991	863 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	SLC6A11	P48066	632 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	GPR85	P60893	370 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	HTRA3	P83110	453 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	HNRNPU	Q00839	825 aa	Known RBP eCLIP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	HSP90AA2P	Q14568	343 aa	Predicted RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	PKN2	Q16513	984 aa	Known RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	RGL3	Q3MIN7	710 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	INTS5	Q6P9B9	1019 aa	Known RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	HHIPL2	Q6UWX4	724 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	RCBTB1	Q8NDN9	531 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	PTPRN2	Q92932	1015 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	FCRL2	Q96LA5	508 aa	Predicted RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	SIN3A	Q96ST3	1273 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	YIPF2	Q9BWQ6	316 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	CDHR2	Q9BYE9	1310 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	EDC4	Q6P2E9	1401 aa	Known RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	PPP1R12A	O14974	1030 aa	Predicted RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	CD8B	P10966	210 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	TM4SF1	P30408	202 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	GYS2	P54840	703 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	FGD2	Q7Z6J4	655 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	MIB1	Q86YT6	1006 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	NETO1	Q8TDF5	533 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	SMURF1	Q9HCE7	757 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	TMPRSS11E	Q9UL52	423 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	SMARCA5	O60264	1052 aa	Predicted RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	GABRE	P78334	506 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	MAP2K1	Q02750	393 aa	Predicted RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	APPBP2	Q92624	585 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	KCNH6	Q9H252	994 aa		2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	SF3B6	Q9Y3B4	125 aa	Known RBP	2.54	□□□□□ -2
PIK3C3-215	ENST00000593098	C7orf72	A4D263	438 aa		2.53	□□□□□ -2
PIK3C3-215	ENST00000593098		H7BY64	318 aa		2.53	□□□□□ -2
PIK3C3-215	ENST00000593098	CP	P00450	1065 aa		2.53	□□□□□ -2
PIK3C3-215	ENST00000593098	F2	P00734	622 aa		2.53	□□□□□ -2
PIK3C3-215	ENST00000593098	COL6A1	P12109	1028 aa		2.53	□□□□□ -2
PIK3C3-215	ENST00000593098	LCP1	P13796	627 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms