RNA–Protein interactions for RNA: ENST00000592262.1

GPATCH1-204, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 1,978 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-204ENST00000592262 CASQ1P31415 396 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 ZCWPW2Q504Y3 356 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 RINT1Q6NUQ1 792 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 LRRC55Q6ZSA7 311 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 SCFD1Q8WVM8 642 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 DNAJC7Q99615 494 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 SEL1LQ9UBV2 794 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 CTIFO43310 598 aaKnown RBP12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 GNG11P61952 73 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 ADAM9Q13443 819 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 KNOP1Q1ED39 458 aaKnown RBP12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 MUM1L1Q5H9M0 696 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 ARHGEF16Q5VV41 709 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 RAD9BQ6WBX8 426 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 SFR1Q86XK3 245 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 ATG4CQ96DT6 458 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 EEF2KMTQ96G04 330 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 KCNH7Q9NS40 1196 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 HOXC10Q9NYD6 342 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 COL20A1Q9P218 1284 aa12.6□□□□□ -0.39
GPATCH1-204ENST00000592262 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 ARHGEF35A5YM69 484 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 PDXKO00764 312 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 KIF5CO60282 957 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 SLU7O95391 586 aaKnown RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 P4HBP07237 508 aaKnown RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 ITGB5P18084 799 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 CYLC1P35663 651 aaPredicted RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 EPS15P42566 896 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 HMGCS2P54868 508 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 RPS6P62753 249 aaKnown RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 MTMR1Q13613 665 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 PRAMEF18Q5VWM3 479 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 PIGOQ8TEQ8 1089 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 DCPSQ96C86 337 aaKnown RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 MAP7D2Q96T17 732 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 RMDN3Q96TC7 470 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 DESI2Q9BSY9 194 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 EDEM3Q9BZQ6 932 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 KCTD10Q9H3F6 313 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 ZSWIM4Q9H7M6 989 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 AGO4Q9HCK5 861 aaKnown RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 OLFML3Q9NRN5 406 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 ADARB2Q9NS39 739 aaKnown RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 ODF2LQ9ULJ1 636 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 PCDHB8Q9UN66 801 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 PCDHB13Q9Y5F0 798 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 EPN1Q9Y6I3 576 aaPredicted RBP12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
GPATCH1-204ENST00000592262 EIF3DO15371 548 aaKnown RBP eCLIP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 IPO7O95373 1038 aaKnown RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 CCND2P30279 289 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MARSP56192 900 aaKnown RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 KRT83P78385 493 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 DGKZQ13574 1117 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MTF1Q14872 753 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 PGM5Q15124 567 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 B3GNT9Q6UX72 402 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 C1orf186Q6ZWK4 172 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 NLRX1Q86UT6 975 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MYCT1Q8N699 235 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 GLIS3Q8NEA6 775 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 TAAR1Q96RJ0 339 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 RUSC1Q9BVN2 902 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 TRAF3IP3Q9Y228 551 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MYPNQ86TC9 1320 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MAFGO15525 162 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 GCNT3O95395 438 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MYCLP12524 364 aaPredicted RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 EIF2AK2P19525 551 aaKnown RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 ERVK-24P63145 666 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 CDK17Q00537 523 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 SNRNP48Q6IEG0 339 aaKnown RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 CATSPERGQ6ZRH7 1159 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 ERO1AQ96HE7 468 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 LXNQ9BS40 222 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 NUCKS1Q9H1E3 243 aaKnown RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 MMRN2Q9H8L6 949 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 L2HGDHQ9H9P8 463 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 PXMP2Q9NR77 195 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 TYW1Q9NV66 732 aaKnown RBP12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 ADAMTS5Q9UNA0 930 aa12.58□□□□□ -0.4
GPATCH1-204ENST00000592262 SAMM50Q9Y512 469 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms