RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 NUCB1Q02818 461 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 TROAPQ12815 778 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 AAMPQ13685 434 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 SART3Q15020 963 aaKnown RBP10.54□□□□□ -0.72
APOC1-207ENST00000592176 MARCH8Q5T0T0 291 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 IER5Q5VY09 327 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
APOC1-207ENST00000592176 EFHBQ8N7U6 833 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 KLHL23Q8NBE8 558 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 POF1BQ8WVV4 589 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 RRP36Q96EU6 259 aaKnown RBP10.54□□□□□ -0.72
APOC1-207ENST00000592176 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 PRRX2Q99811 253 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 FTHL17Q9BXU8 183 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 AGO3Q9H9G7 860 aaKnown RBP10.54□□□□□ -0.72
APOC1-207ENST00000592176 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 BRWD1Q9NSI6 2320 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 CLEC1BQ9P126 229 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 TUBE1Q9UJT0 475 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 MRPL42Q9Y6G3 142 aaKnown RBP10.54□□□□□ -0.72
APOC1-207ENST00000592176 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
APOC1-207ENST00000592176 LAMA4Q16363 1823 aa10.54□□□□□ -0.72
APOC1-207ENST00000592176 MBLAC1A4D2B0 266 aaPredicted RBP10.53□□□□□ -0.72
APOC1-207ENST00000592176 LOC730098B7Z3J9 87 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 PIK3CDO00329 1044 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 MEIS2O14770 477 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 IGHDP01880 384 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 NRIP1P48552 1158 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 PTPN5P54829 565 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 ZXDAP98168 799 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 COASYQ13057 564 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 PAN2Q504Q3 1202 aaKnown RBP10.53□□□□□ -0.72
APOC1-207ENST00000592176 IER5LQ5T953 404 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 ADGRD2Q7Z7M1 963 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
APOC1-207ENST00000592176 NPAS4Q8IUM7 802 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 SUGP1Q8IWZ8 645 aaKnown RBP10.53□□□□□ -0.72
APOC1-207ENST00000592176 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 NCOA7Q8NI08 942 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 MICAL1Q8TDZ2 1067 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 TNPO1Q92973 898 aaKnown RBP10.53□□□□□ -0.72
APOC1-207ENST00000592176 GPRASP2Q96D09 838 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 FAM49AQ9H0Q0 323 aaPredicted RBP10.53□□□□□ -0.72
APOC1-207ENST00000592176 TLE6Q9H808 572 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 SQORQ9Y6N5 450 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 MICAL3Q7RTP6 2002 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
APOC1-207ENST00000592176 E7EWF7 191 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 M0QZ92 97 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 MAFGO15525 162 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 CYP21A2P08686 494 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 INSRRP14616 1297 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 KCNA2P16389 499 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 ITGB5P18084 799 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 SMARCA1P28370 1054 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 CRIPAKQ8N1N5 446 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 NME8Q8N427 588 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 SMRP1Q8NCR6 262 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 CTCFLQ8NI51 663 aaPredicted RBP10.52□□□□□ -0.73
APOC1-207ENST00000592176 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 ZBTB10Q96DT7 871 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 MAP3K14Q99558 947 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 PHF7Q9BWX1 381 aaPredicted RBP10.52□□□□□ -0.73
APOC1-207ENST00000592176 IL25Q9H293 177 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 PSTPIP2Q9H939 334 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 PKD2L1Q9P0L9 805 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 SEC63Q9UGP8 760 aaKnown RBP10.52□□□□□ -0.73
APOC1-207ENST00000592176 LRFN2Q9ULH4 789 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 PADI3Q9ULW8 664 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 TRPV2Q9Y5S1 764 aa10.52□□□□□ -0.73
APOC1-207ENST00000592176 SCG2P13521 617 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 KIF5BP33176 963 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 PTH1RQ03431 593 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 TMEM62Q0P6H9 643 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 PAK2Q13177 524 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 CBX2Q14781 532 aaPredicted RBP10.51□□□□□ -0.73
APOC1-207ENST00000592176 SPOUT1Q5T280 376 aaKnown RBP10.51□□□□□ -0.73
APOC1-207ENST00000592176 FBXL6Q8N531 539 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 IGDCC4Q8TDY8 1250 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 RUFY2Q8WXA3 655 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 RPGRIP1Q96KN7 1286 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 LZTS2Q9BRK4 669 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 SPZ1Q9BXG8 430 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 CELF4Q9BZC1 486 aaKnown RBP10.51□□□□□ -0.73
APOC1-207ENST00000592176 AZI2Q9H6S1 392 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 USP15Q9Y4E8 981 aaPredicted RBP10.51□□□□□ -0.73
APOC1-207ENST00000592176 PCDHB7Q9Y5E2 793 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 PCDHB12Q9Y5F1 795 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 PCDHA2Q9Y5H9 948 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 UBIAD1Q9Y5Z9 338 aa10.51□□□□□ -0.73
APOC1-207ENST00000592176 PER2O15055 1255 aa10.5□□□□□ -0.73
APOC1-207ENST00000592176 ST18O60284 1047 aa10.5□□□□□ -0.73
APOC1-207ENST00000592176 IBSPP21815 317 aaPredicted RBP10.5□□□□□ -0.73
APOC1-207ENST00000592176 GNAQP50148 359 aa10.5□□□□□ -0.73
APOC1-207ENST00000592176 GATMP50440 423 aa10.5□□□□□ -0.73
APOC1-207ENST00000592176 UBE3AQ05086 875 aa10.5□□□□□ -0.73
APOC1-207ENST00000592176 NFX1Q12986 1120 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms