RNA–Protein interactions for RNA: ENST00000589553.5

TMC6-212, Transcript of transmembrane channel like 6, humanhuman

TSL 2 BASIC

Gene TMC6, Length 2,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-212ENST00000589553 SYDE2Q5VT97 1194 aa23.08■■□□□ 1.29
TMC6-212ENST00000589553 SLC30A10Q6XR72 485 aa23.08■■□□□ 1.29
TMC6-212ENST00000589553 SYN2Q92777 582 aaPredicted RBP23.08■■□□□ 1.29
TMC6-212ENST00000589553 TDRD3Q9H7E2 651 aaKnown RBP23.08■■□□□ 1.29
TMC6-212ENST00000589553 MED4Q9NPJ6 270 aa23.08■■□□□ 1.29
TMC6-212ENST00000589553 CETN3O15182 167 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 RNF40O75150 1001 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 RPA1P27694 616 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 HSPA1LP34931 641 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 SREBF1P36956 1147 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 EPS15P42566 896 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 AARSP49588 968 aaKnown RBP eCLIP23.07■■□□□ 1.288e-7■■■□□ 19.2
TMC6-212ENST00000589553 DNA2P51530 1060 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 EDRF1Q3B7T1 1238 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 SPICE1Q8N0Z3 855 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 MS4A14Q96JA4 679 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 NUCKS1Q9H1E3 243 aaKnown RBP23.07■■□□□ 1.28
TMC6-212ENST00000589553 DNM3Q9UQ16 869 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 SMCHD1A6NHR9 2005 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 A0A087X0T9 212 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 MSH4O15457 936 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 PRPF6O94906 941 aaKnown RBP23.07■■□□□ 1.28
TMC6-212ENST00000589553 GH2P01242 217 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 FAM228BP0C875 321 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 CCDC181Q5TID7 509 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 ARHGAP27Q6ZUM4 889 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 SYT2Q8N9I0 419 aaPredicted RBP23.07■■□□□ 1.28
TMC6-212ENST00000589553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.07■■□□□ 1.28
TMC6-212ENST00000589553 PACSIN1Q9BY11 444 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 HDAC9Q9UKV0 1011 aa23.07■■□□□ 1.28
TMC6-212ENST00000589553 KLRC1P26715 233 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 ZSCAN26Q16670 478 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 GMCL1P1Q8NEA9 526 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 ERMNQ8TAM6 284 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 FAM204AQ9H8W3 233 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 FAM184BQ9ULE4 1060 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 A0A1W2PRG0 241 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 SLC26A4O43511 780 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 SLC9A1P19634 815 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 PPP4R3CPQ6ZMV5 832 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 AENQ8WTP8 325 aaKnown RBP23.06■■□□□ 1.28
TMC6-212ENST00000589553 GMCL1Q96IK5 515 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 ADAMTS1Q9UHI8 967 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 VAV3Q9UKW4 847 aa23.06■■□□□ 1.28
TMC6-212ENST00000589553 ATAD5Q96QE3 1844 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 TBX3O15119 743 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 PALMO75781 387 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 CAPN2P17655 700 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 ITIH3Q06033 890 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 KLHL30Q0D2K2 578 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 SLC18A3Q16572 532 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 CCDC70Q6NSX1 233 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.05■■□□□ 1.28
TMC6-212ENST00000589553 AKT1S1Q96B36 256 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 RUSC1Q9BVN2 902 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 MRIQ9BWK5 157 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 BHMT2Q9H2M3 363 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 RBM12Q9NTZ6 932 aaKnown RBP23.05■■□□□ 1.28
TMC6-212ENST00000589553 ZNF646O15015 1829 aaPredicted RBP23.05■■□□□ 1.28
TMC6-212ENST00000589553 EML1O00423 815 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 FTCDO95954 541 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 BMP3P12645 472 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 GGCXP38435 758 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 KNOP1Q1ED39 458 aaKnown RBP23.05■■□□□ 1.28
TMC6-212ENST00000589553 EPM2AIP1Q7L775 607 aaPredicted RBP23.05■■□□□ 1.28
TMC6-212ENST00000589553 RNF10Q8N5U6 811 aaKnown RBP23.05■■□□□ 1.28
TMC6-212ENST00000589553 RGL1Q9NZL6 768 aa23.05■■□□□ 1.28
TMC6-212ENST00000589553 ASIC2Q16515 512 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 PACSIN2Q9UNF0 486 aaPredicted RBP23.04■■□□□ 1.28
TMC6-212ENST00000589553 TRAF3IP3Q9Y228 551 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 A0A0U1RQG5 324 aaPredicted RBP23.04■■□□□ 1.28
TMC6-212ENST00000589553 AGPSO00116 658 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 MMP14P50281 582 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 KCNA1Q09470 495 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 NAB2Q15742 525 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 DPY19L2P1Q6NXN4 242 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 AIPL1Q9NZN9 384 aa23.04■■□□□ 1.28
TMC6-212ENST00000589553 ARMCX3Q9UH62 379 aaPredicted RBP23.04■■□□□ 1.28
TMC6-212ENST00000589553 POLD1P28340 1107 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 HDLBPQ00341 1268 aaKnown RBP23.03■■□□□ 1.28
TMC6-212ENST00000589553 AOC3Q16853 763 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 KIAA0753Q2KHM9 967 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 DCAF17Q5H9S7 520 aaPredicted RBP23.03■■□□□ 1.28
TMC6-212ENST00000589553 DNAAF5Q86Y56 855 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 FAM20AQ96MK3 541 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 AKAP3O75969 853 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 FOSP01100 380 aaPredicted RBP23.03■■□□□ 1.28
TMC6-212ENST00000589553 ACTN2P35609 894 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 PAFAH1B1P43034 410 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 SND1Q7KZF4 910 aaKnown RBP eCLIP23.03■■□□□ 1.287e-7■□□□□ 8.6
TMC6-212ENST00000589553 IKZF4Q9H2S9 585 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 SERPINA10Q9UK55 444 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 PRR12Q9ULL5 1215 aa23.03■■□□□ 1.28
TMC6-212ENST00000589553 SFI1A8K8P3 1242 aa23.02■■□□□ 1.28
TMC6-212ENST00000589553 CIITAP33076 1130 aa23.02■■□□□ 1.28
TMC6-212ENST00000589553 ECE1P42892 770 aa23.02■■□□□ 1.28
TMC6-212ENST00000589553 CASP4P49662 377 aa23.02■■□□□ 1.28
TMC6-212ENST00000589553 MUM1L1Q5H9M0 696 aa23.02■■□□□ 1.28
TMC6-212ENST00000589553 TRERF1Q96PN7 1200 aa23.02■■□□□ 1.28
TMC6-212ENST00000589553 EIF2AK1Q9BQI3 630 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms