RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ARMCX3Q9UH62 379 aaPredicted RBP21.79■■□□□ 1.08
MBD1-216ENST00000587605 SALL4Q9UJQ4 1053 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 HDAC9Q9UKV0 1011 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 COL11A2P13942 1736 aaPredicted RBP21.79■■□□□ 1.08
MBD1-216ENST00000587605 AFPP02771 609 aaKnown RBP21.78■■□□□ 1.08
MBD1-216ENST00000587605 CYP3A4P08684 503 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 STAT3P40763 770 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 IFI16Q16666 785 aaKnown RBP21.78■■□□□ 1.08
MBD1-216ENST00000587605 LRRC1Q9BTT6 524 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 TSPYL1Q9H0U9 437 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 FAM198AQ9UFP1 575 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 SERPINA10Q9UK55 444 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 FBXL5Q9UKA1 691 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 GOLGA6BA6NDN3 693 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 F5H6K3 240 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 RAD21O60216 631 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 GAP43P17677 238 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 KLRC3Q07444 240 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 ABCB5Q2M3G0 1257 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 C8orf74Q6P047 294 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 TBC1D5Q92609 795 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 CAVIN3Q969G5 261 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 LENG9Q96B70 501 aa21.78■■□□□ 1.08
MBD1-216ENST00000587605 TYW1Q9NV66 732 aaKnown RBP21.78■■□□□ 1.08
MBD1-216ENST00000587605 DDTLA6NHG4 134 aaPredicted RBP21.77■■□□□ 1.08
MBD1-216ENST00000587605 SPATA31C1P0DKV0 1188 aa21.77■■□□□ 1.08
MBD1-216ENST00000587605 MYBL2P10244 700 aa21.77■■□□□ 1.08
MBD1-216ENST00000587605 SIAH1Q8IUQ4 282 aa21.77■■□□□ 1.08
MBD1-216ENST00000587605 ZHX3Q9H4I2 956 aa21.77■■□□□ 1.08
MBD1-216ENST00000587605 ATRNL1Q5VV63 1379 aa21.77■■□□□ 1.07
MBD1-216ENST00000587605 PIK3CDO00329 1044 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 ZMYND10O75800 440 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 ALS2CLQ60I27 953 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 REEP2Q9BRK0 252 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 TULP2O00295 520 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 BUB1O43683 1085 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 OPA1O60313 960 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 PHACTR2O75167 634 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 TBCAO75347 108 aaKnown RBP21.76■■□□□ 1.07
MBD1-216ENST00000587605 ENTPD3O75355 529 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 EYA4O95677 639 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 NDUFB10O96000 172 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 BMP3P12645 472 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 ERCC3P19447 782 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 CACNB1Q02641 598 aaPredicted RBP21.76■■□□□ 1.07
MBD1-216ENST00000587605 TCP10Q12799 353 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 DACT2Q5SW24 774 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 MEI1Q5TIA1 1274 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 SFR1Q86XK3 245 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 IFT20Q8IY31 132 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 ANKRD13CQ8N6S4 541 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 FLAD1Q8NFF5 587 aa21.76■■□□□ 1.07
MBD1-216ENST00000587605 GTPBP10A4D1E9 387 aaKnown RBP21.75■■□□□ 1.07
MBD1-216ENST00000587605 GOLGA8KD6RF30 607 aa21.75■■□□□ 1.07
MBD1-216ENST00000587605 PALMO75781 387 aa21.75■■□□□ 1.07
MBD1-216ENST00000587605 XRCC5P13010 732 aaKnown RBP21.75■■□□□ 1.07
MBD1-216ENST00000587605 GGCXP38435 758 aa21.75■■□□□ 1.07
MBD1-216ENST00000587605 PABPC4Q13310 644 aaKnown RBP eCLIP21.75■■□□□ 1.07
MBD1-216ENST00000587605 SND1Q7KZF4 910 aaKnown RBP eCLIP21.75■■□□□ 1.07
MBD1-216ENST00000587605 SH3BP5LQ7L8J4 393 aa21.75■■□□□ 1.07
MBD1-216ENST00000587605 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.75■■□□□ 1.07
MBD1-216ENST00000587605 DMGDHQ9UI17 866 aaKnown RBP21.75■■□□□ 1.07
MBD1-216ENST00000587605 VAV3Q9UKW4 847 aa21.75■■□□□ 1.07
MBD1-216ENST00000587605 NCK2O43639 380 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 EPB41P11171 864 aaKnown RBP21.74■■□□□ 1.07
MBD1-216ENST00000587605 PRKCIP41743 596 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 RBM5P52756 815 aaKnown RBP eCLIP21.74■■□□□ 1.07
MBD1-216ENST00000587605 NFIL3Q16649 462 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 EXOC3L4Q17RC7 722 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 KIAA0753Q2KHM9 967 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 KIAA0825Q8IV33 1275 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 FAM133AQ8N9E0 248 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 TUFT1Q9NNX1 390 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 OLFML3Q9NRN5 406 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 ZNF646O15015 1829 aaPredicted RBP21.74■■□□□ 1.07
MBD1-216ENST00000587605 A0A087X0T9 212 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 EIF3DO15371 548 aaKnown RBP eCLIP21.74■■□□□ 1.07
MBD1-216ENST00000587605 MSH4O15457 936 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 FAM228BP0C875 321 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 MUTP22033 750 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 IKQ13123 557 aaPredicted RBP21.74■■□□□ 1.07
MBD1-216ENST00000587605 RBM26Q5T8P6 1007 aaKnown RBP21.74■■□□□ 1.07
MBD1-216ENST00000587605 FAM76AQ8TAV0 307 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 SPAG5Q96R06 1193 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 DBNDD1Q9H9R9 158 aa21.74■■□□□ 1.07
MBD1-216ENST00000587605 UBE4BO95155 1302 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 FAM86B1E9PN63 330 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 AGPSO00116 658 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 FAM86B2P0C5J1 330 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 KLRC1P26715 233 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 CXCR5P32302 372 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 CASP5P51878 434 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 APBA1Q02410 837 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 RAD51AP2Q09MP3 1159 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 SLC15A2Q16348 729 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 DPY19L2P1Q6NXN4 242 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 GBP6Q6ZN66 633 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 KRT27Q7Z3Y8 459 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 VPS36Q86VN1 386 aa21.73■■□□□ 1.07
MBD1-216ENST00000587605 GSPT2Q8IYD1 628 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms