RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ENAHQ8N8S7 591 aaPredicted RBP8.95□□□□□ -0.98
VMP1-204ENST00000587259 SMARCC2Q8TAQ2 1214 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 SYAP1Q96A49 352 aaPredicted RBP8.95□□□□□ -0.98
VMP1-204ENST00000587259 TCEANC2Q96MN5 208 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 MPHOSPH6Q99547 160 aaKnown RBP8.95□□□□□ -0.98
VMP1-204ENST00000587259 ZSCAN16Q9H4T2 348 aaPredicted RBP8.95□□□□□ -0.98
VMP1-204ENST00000587259 KAT14Q9H8E8 782 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 ABCB11O95342 1321 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 MUC6Q6W4X9 2439 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 KLF18A0A0U1RQI7 1052 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 ABHD14A-ACY1A0A1B0GW23 586 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 CCDC69A6NI79 296 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 H3BQV1 296 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 SH2B2O14492 632 aaPredicted RBP8.94□□□□□ -0.98
VMP1-204ENST00000587259 TREHO43280 583 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 GPR37L1O60883 481 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 GGPS1O95749 300 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 CALM1P0DP23 149 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 CALM2P0DP24 149 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 CALM3P0DP25 149 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 PDIA3P30101 505 aaKnown RBP8.94□□□□□ -0.98
VMP1-204ENST00000587259 RBL2Q08999 1139 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 APOBRQ0VD83 1088 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 SCRN1Q12765 414 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 PTK7Q13308 1070 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 IKBKEQ14164 716 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 CLUL1Q15846 466 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 TCEAL5Q5H9L2 206 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 GPATCH4Q5T3I0 446 aaKnown RBP8.94□□□□□ -0.98
VMP1-204ENST00000587259 ATL3Q6DD88 541 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 MCTP1Q6DN14 999 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 PTCRAQ6ISU1 281 aaPredicted RBP8.94□□□□□ -0.98
VMP1-204ENST00000587259 TRIM50Q86XT4 487 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 FAM178BQ8IXR5 827 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 GJD3Q8N144 294 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 NECAB1Q8N987 351 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 TMEM87AQ8NBN3 555 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 PPTC7Q8NI37 304 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 PIBF1Q8WXW3 757 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 WASF1Q92558 559 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 SPATA33Q96N06 139 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
VMP1-204ENST00000587259 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 ZSWIM5Q9P217 1185 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 NAP1L2Q9ULW6 460 aaPredicted RBP8.94□□□□□ -0.98
VMP1-204ENST00000587259 SLC12A7Q9Y666 1083 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 STK36Q9NRP7 1315 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 SIP14410 1827 aa8.94□□□□□ -0.98
VMP1-204ENST00000587259 KIAA1217Q5T5P2 1943 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 VPS37CA5D8V6 355 aaPredicted RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 B4DLN1 442 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 IFIT3O14879 490 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 ZBTB43O43298 467 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 EIF3JO75822 258 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 PARP1P09874 1014 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 UBA1P22314 1058 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 GTF2F1P35269 517 aaKnown RBP eCLIP8.93□□□□□ -0.98
VMP1-204ENST00000587259 METAP2P50579 478 aaKnown RBP eCLIP8.93□□□□□ -0.98
VMP1-204ENST00000587259 MRPL12P52815 198 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 KRT85P78386 507 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 SP4Q02446 784 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 ST3GAL1Q11201 340 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 STK3Q13188 491 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 PKP1Q13835 747 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 WTAPQ15007 396 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 LEXMQ3ZCV2 418 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 EPC2Q52LR7 807 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 CELF3Q5SZQ8 465 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 MYSM1Q5VVJ2 828 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 NFXL1Q6ZNB6 911 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 CYB5R4Q7L1T6 521 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 FCHSD1Q86WN1 690 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 HOMER1Q86YM7 354 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 NSUN7Q8NE18 718 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 PDCD2LQ9BRP1 358 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 C16orf70Q9BSU1 422 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 MTMR6Q9Y217 621 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 ZDHHC9Q9Y397 364 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 MRPL11Q9Y3B7 192 aaKnown RBP8.93□□□□□ -0.98
VMP1-204ENST00000587259 MYH7BA7E2Y1 1941 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 MYO7AQ13402 2215 aa8.93□□□□□ -0.98
VMP1-204ENST00000587259 GRXCR2A6NFK2 248 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 RSPH10B2B2RC85 870 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 AMHP03971 560 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 RSPH10BP0C881 870 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 SMIM10L2AP0DMW4 78 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 SMIM10L2BP0DMW5 78 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 HSD17B4P51659 736 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 ANTXR2P58335 489 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 HTRA4P83105 476 aaPredicted RBP8.92□□□□□ -0.98
VMP1-204ENST00000587259 DLX2Q07687 328 aaPredicted RBP8.92□□□□□ -0.98
VMP1-204ENST00000587259 LAMC2Q13753 1193 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 PGM5Q15124 567 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 ASPRV1Q53RT3 343 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 APOA5Q6Q788 366 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 SERINC5Q86VE9 423 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 DGKHQ86XP1 1220 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 MCF2L2Q86YR7 1114 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 TRIM22Q8IYM9 498 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms