RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.88	□□□□□ -0.19
PKN1-208	ENST00000586900	BACH1	O14867	736 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	CHMP2A	O43633	222 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	ATN1	P54259	1190 aa	Predicted RBP	13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	PSMC6	P62333	389 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	SF3A1	Q15459	793 aa	Known RBP	13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	SWSAP1	Q6NVH7	229 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	FAM173B	Q6P4H8	233 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	ANKRD33	Q7Z3H0	272 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	RAB34	Q9BZG1	259 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	STK24	Q9Y6E0	443 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	IGSF9B	Q9UPX0	1349 aa		13.87	□□□□□ -0.19
PKN1-208	ENST00000586900	KAT6A	Q92794	2004 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	EML1	O00423	815 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	DKC1	O60832	514 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	P4HB	P07237	508 aa	Known RBP	13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	NASP	P49321	788 aa	Predicted RBP	13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	RTP1	P59025	263 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	PTPA	Q15257	358 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	LRRC26	Q2I0M4	334 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	PDXDC2P	Q6P474	469 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	DTHD1	Q6ZMT9	781 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	TRIM50	Q86XT4	487 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	C7orf31	Q8N865	590 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	IGSF22	Q8N9C0	903 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	NEK9	Q8TD19	979 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	ATP6V0A1	Q93050	837 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	USP28	Q96RU2	1077 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	GABBR1	Q9UBS5	961 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	GTF2IRD1	Q9UHL9	959 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	ATP6V1D	Q9Y5K8	247 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	ALPK3	Q96L96	1907 aa		13.86	□□□□□ -0.19
PKN1-208	ENST00000586900	HBP1	O60381	514 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	CAPN15	O75808	1086 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	HOXC8	P31273	242 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	TEC	P42680	631 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	QARS	P47897	775 aa	Known RBP	13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	PSMC5	P62195	406 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	SLC39A14	Q15043	492 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	PLCB4	Q15147	1175 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	NCAPH2	Q6IBW4	605 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	ATP8B4	Q8TF62	1192 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	BBX	Q8WY36	941 aa	Predicted RBP	13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	FAM167A	Q96KS9	214 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	HSD17B14	Q9BPX1	270 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	RNPEP	Q9H4A4	650 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	HDAC6	Q9UBN7	1215 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	CLIC4	Q9Y696	253 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	NRCAM	Q92823	1304 aa		13.85	□□□□□ -0.19
PKN1-208	ENST00000586900	POTEB3	A0JP26	581 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	POTEM	A6NI47	508 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	RRN3P2	A6NIE6	340 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	DCDC2C	A8MYV0	355 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	TLR3	O15455	904 aa	Known RBP	13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	ZNF862	O60290	1169 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	SLITRK3	O94933	977 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	YEATS4	O95619	227 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	CD4	P01730	458 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	SMIM10L2A	P0DMW4	78 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	SMIM10L2B	P0DMW5	78 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	GNAT1	P11488	350 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	ATP4A	P20648	1035 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	MUT	P22033	750 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	TLE2	Q04725	743 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	IL17A	Q16552	155 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	TRIM60	Q495X7	471 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	POTEB	Q6S5H4	581 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	FAM126B	Q8IXS8	530 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	C4orf19	Q8IY42	314 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	ERMN	Q8TAM6	284 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	AK8	Q96MA6	479 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	TUFT1	Q9NNX1	390 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	NRBP2	Q9NSY0	501 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	LRWD1	Q9UFC0	647 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	CFAP45	Q9UL16	551 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	ATP11B	Q9Y2G3	1177 aa		13.84	□□□□□ -0.19
PKN1-208	ENST00000586900	COL1A2	P08123	1366 aa		13.83	□□□□□ -0.19
PKN1-208	ENST00000586900	C17orf102	A2RUQ5	167 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	LYPLA2	O95372	231 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	MARK3	P27448	753 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	ADAM17	P78536	824 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	UGCG	Q16739	394 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	XKR3	Q5GH77	459 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	FAM47C	Q5HY64	1035 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	ZNF484	Q5JVG2	852 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	HAUS3	Q68CZ6	603 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	CKAP2L	Q8IYA6	745 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	LINC00301	Q8NCQ3	95 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	DYDC2	Q96IM9	177 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	IPO9	Q96P70	1041 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	ZSWIM4	Q9H7M6	989 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	TRPC6	Q9Y210	931 aa		13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	SRPRB	Q9Y5M8	271 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-208	ENST00000586900	TRIP12	Q14669	1992 aa	Predicted RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms