RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 GRM6O15303 877 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 DGKIO75912 1065 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 SSTR3P32745 418 aaPredicted RBP16.61■□□□□ 0.25
SDF2-202ENST00000585428 MCM5P33992 734 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 MTMR1Q13613 665 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 FANCBQ8NB91 859 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 GLG1Q92896 1179 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
SDF2-202ENST00000585428 C11orf84Q9BUA3 381 aaPredicted RBP16.61■□□□□ 0.25
SDF2-202ENST00000585428 LMAN2LQ9H0V9 348 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 AGO3Q9H9G7 860 aaKnown RBP16.61■□□□□ 0.25
SDF2-202ENST00000585428 TUBE1Q9UJT0 475 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 PCDHA6Q9UN73 950 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 RWDD3Q9Y3V2 267 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 PCDHA8Q9Y5H6 950 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 SQORQ9Y6N5 450 aa16.61■□□□□ 0.25
SDF2-202ENST00000585428 MICAL3Q7RTP6 2002 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 RRN3P2A6NIE6 340 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CALM1P0DP23 149 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CALM2P0DP24 149 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CALM3P0DP25 149 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 INSRRP14616 1297 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 MARK3P27448 753 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CTNNB1P35222 781 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
SDF2-202ENST00000585428 ZP2Q05996 745 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 HYAL1Q12794 435 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CAMK1Q14012 370 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 NFXL1Q6ZNB6 911 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 TSHZ1Q6ZSZ6 1077 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
SDF2-202ENST00000585428 CLDND1Q9NY35 253 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 CDY2AQ9Y6F7 541 aa16.6■□□□□ 0.25
SDF2-202ENST00000585428 hCG_1642624A0A1W2PR95 340 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
SDF2-202ENST00000585428 RXRAP19793 462 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 DLX2Q07687 328 aaPredicted RBP16.59■□□□□ 0.25
SDF2-202ENST00000585428 NECTIN1Q15223 517 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 UBE2SQ16763 222 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 ADHFE1Q8IWW8 467 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 CCDC82Q8N4S0 544 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 ZBTB10Q96DT7 871 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 PLVAPQ9BX97 442 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 PLAGL2Q9UPG8 496 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 FAM50BQ9Y247 325 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 ADGRA3Q8IWK6 1321 aa16.59■□□□□ 0.25
SDF2-202ENST00000585428 SLC27A2O14975 620 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 MRPS6P82932 125 aaKnown RBP16.58■□□□□ 0.24
SDF2-202ENST00000585428 ADAM15Q13444 863 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 BTG3Q14201 252 aaPredicted RBP16.58■□□□□ 0.24
SDF2-202ENST00000585428 IER5Q5VY09 327 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 EP400NLQ6ZTU2 488 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 PLPPR4Q7Z2D5 763 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 CYP2W1Q8TAV3 490 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 LINC01599Q8WXQ3 324 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 P2RX5Q93086 422 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 MXRA8Q9BRK3 442 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 KCNH7Q9NS40 1196 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 PCDHA2Q9Y5H9 948 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 BRWD1Q9NSI6 2320 aa16.58■□□□□ 0.24
SDF2-202ENST00000585428 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 DCXO43602 365 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 ATG7O95352 703 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 CD52P31358 61 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.24
SDF2-202ENST00000585428 IGBP1P78318 339 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 SMAD2Q15796 467 aaKnown RBP16.57■□□□□ 0.24
SDF2-202ENST00000585428 NAALADL2Q58DX5 795 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 TMTC3Q6ZXV5 915 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 SGMS1Q86VZ5 419 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 TNPO1Q92973 898 aaKnown RBP16.57■□□□□ 0.24
SDF2-202ENST00000585428 FTHL17Q9BXU8 183 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 JPH1Q9HDC5 661 aaPredicted RBP16.57■□□□□ 0.24
SDF2-202ENST00000585428 ALG13Q9NP73 1137 aaKnown RBP16.57■□□□□ 0.24
SDF2-202ENST00000585428 PKD2L1Q9P0L9 805 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 SLC9A2Q9UBY0 812 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 SLC12A7Q9Y666 1083 aa16.57■□□□□ 0.24
SDF2-202ENST00000585428 MBTPS2O43462 519 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 MMP1P03956 469 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 DNAJB1P25685 340 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 PLCB4Q15147 1175 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 CMTR2Q8IYT2 770 aaKnown RBP16.56■□□□□ 0.24
SDF2-202ENST00000585428 NME8Q8N427 588 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 SPPL3Q8TCT6 385 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 CELF4Q9BZC1 486 aaKnown RBP16.56■□□□□ 0.24
SDF2-202ENST00000585428 PADI3Q9ULW8 664 aa16.56■□□□□ 0.24
SDF2-202ENST00000585428 NFASCO94856 1347 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 IGSF9BQ9UPX0 1349 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 KDM3AQ9Y4C1 1321 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 IGKV6D-21A0A0A0MT36 114 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 MEIS1O00470 390 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 ARP10275 920 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 IRS1P35568 1242 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 STAT5BP51692 787 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 ACTR2P61160 394 aa16.55■□□□□ 0.24
SDF2-202ENST00000585428 FUT2Q10981 343 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms