RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 CIITAP33076 1130 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 PRR16Q569H4 304 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 GALNT17Q6IS24 598 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 HERC6Q8IVU3 1022 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 FAM177A1Q8N128 213 aaPredicted RBP23.57■■□□□ 1.36
TOP3A-218ENST00000584669 TBCKQ8TEA7 893 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 WNT8BQ93098 351 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 RNPEPQ9H4A4 650 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 ZNF215Q9UL58 517 aaPredicted RBP23.57■■□□□ 1.36
TOP3A-218ENST00000584669 LOXHD1Q8IVV2 1947 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 CDH23Q9H251 3354 aa23.57■■□□□ 1.36
TOP3A-218ENST00000584669 KIF28PB7ZC32 967 aa23.56■■□□□ 1.36
TOP3A-218ENST00000584669 BAIAP3O94812 1187 aa23.56■■□□□ 1.36
TOP3A-218ENST00000584669 ACTR2P61160 394 aa23.56■■□□□ 1.36
TOP3A-218ENST00000584669 PTK7Q13308 1070 aa23.56■■□□□ 1.36
TOP3A-218ENST00000584669 PHOSPHO2Q8TCD6 241 aa23.56■■□□□ 1.36
TOP3A-218ENST00000584669 PCYT2Q99447 389 aa23.56■■□□□ 1.36
TOP3A-218ENST00000584669 PRUNE2Q8WUY3 3088 aa23.56■■□□□ 1.36
TOP3A-218ENST00000584669 EVPLQ92817 2033 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 SIP14410 1827 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 C17orf102A2RUQ5 167 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 IPO5O00410 1097 aaKnown RBP23.55■■□□□ 1.36
TOP3A-218ENST00000584669 DHX15O43143 795 aaKnown RBP23.55■■□□□ 1.36
TOP3A-218ENST00000584669 XBP1P17861 261 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 MARK3P27448 753 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 HOXC8P31273 242 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 SETQ01105 290 aaPredicted RBP23.55■■□□□ 1.36
TOP3A-218ENST00000584669 CCDC83Q8IWF9 413 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 OXER1Q8TDS5 423 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 WASF1Q92558 559 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 LENG9Q96B70 501 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 ZNF577Q9BSK1 485 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 SETD4Q9NVD3 440 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 CHD9Q3L8U1 2897 aa23.55■■□□□ 1.36
TOP3A-218ENST00000584669 EYSQ5T1H1 3165 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 RBAK-RBAKDNI3L0D1 243 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 NBNO60934 754 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 LGR5O75473 907 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 CCNE2O96020 404 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 USP11P51784 963 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 FOSBP53539 338 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 WDR5P61964 334 aaKnown RBP23.54■■□□□ 1.36
TOP3A-218ENST00000584669 RBL2Q08999 1139 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 GPNMBQ14956 572 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 TRIM71Q2Q1W2 868 aaKnown RBP23.54■■□□□ 1.36
TOP3A-218ENST00000584669 ZNF618Q5T7W0 954 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 CNKSR3Q6P9H4 555 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 GLG1Q92896 1179 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 ATP6V0A1Q93050 837 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 SMARCAD1Q9H4L7 1026 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 THEGQ9P2T0 379 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 PTPRSQ13332 1948 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 EMSYQ7Z589 1322 aa23.54■■□□□ 1.36
TOP3A-218ENST00000584669 RFXAPO00287 272 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 TREHO43280 583 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 TLL1O43897 1013 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 PARNO95453 639 aaKnown RBP23.53■■□□□ 1.36
TOP3A-218ENST00000584669 NONOQ15233 471 aaKnown RBP eCLIP23.53■■□□□ 1.36
TOP3A-218ENST00000584669 INF2Q27J81 1249 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 TJAP1Q5JTD0 557 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 TMCO2Q7Z6W1 182 aaPredicted RBP23.53■■□□□ 1.36
TOP3A-218ENST00000584669 SERINC5Q86VE9 423 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 SYMPKQ92797 1274 aaKnown RBP23.53■■□□□ 1.36
TOP3A-218ENST00000584669 ZBED2Q9BTP6 218 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 UPF2Q9HAU5 1272 aaKnown RBP23.53■■□□□ 1.36
TOP3A-218ENST00000584669 ERAP1Q9NZ08 941 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 GTF3C3Q9Y5Q9 886 aa23.53■■□□□ 1.36
TOP3A-218ENST00000584669 ATG7O95352 703 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 TDP2O95551 362 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 THPOP40225 353 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 DEFB103AP81534 67 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 RABEP1Q15276 862 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 KRT25Q7Z3Z0 450 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 LMBR1Q8WVP7 490 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 ARNTL2Q8WYA1 636 aa23.52■■□□□ 1.36
TOP3A-218ENST00000584669 MSH4O15457 936 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 ARHGEF15O94989 841 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 CXCL10P02778 98 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 ADAM17P78536 824 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 TAP1Q03518 808 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 TCTN1Q2MV58 587 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 GJA10Q969M2 543 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 ZSCAN31Q96LW9 406 aaPredicted RBP23.51■■□□□ 1.35
TOP3A-218ENST00000584669 AZI2Q9H6S1 392 aa23.51■■□□□ 1.35
TOP3A-218ENST00000584669 PRRC2BQ5JSZ5 2229 aaKnown RBP23.5■■□□□ 1.35
TOP3A-218ENST00000584669 CCDC194A0A1B0GVG4 234 aa23.5■■□□□ 1.35
TOP3A-218ENST00000584669 GTPBP6O43824 516 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-218ENST00000584669 SKIV2LQ15477 1246 aaKnown RBP23.5■■□□□ 1.35
TOP3A-218ENST00000584669 ABHD15Q6UXT9 468 aa23.5■■□□□ 1.35
TOP3A-218ENST00000584669 TBC1D22BQ9NU19 505 aa23.5■■□□□ 1.35
TOP3A-218ENST00000584669 MICAL3Q7RTP6 2002 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 IGKV6D-21A0A0A0MT36 114 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 ABHD14A-ACY1A0A1B0GW23 586 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 FAM205CA6NFA0 338 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 EPOPA6NHQ4 379 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 GNAT1P11488 350 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 STAT5BP51692 787 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 PPFIA1Q13136 1202 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 NR5A1Q13285 461 aa23.49■■□□□ 1.35
TOP3A-218ENST00000584669 IKBKEQ14164 716 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms