RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ZNF185O15231 689 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 KIF5CO60282 957 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 CCNE1P24864 410 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 ERVK-24P63145 666 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 SF3A3Q12874 501 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■■■ 39.1
RFFL-212ENST00000584655 NR1I3Q14994 352 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 UGCGQ16739 394 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.34□□□□□ -0.59
RFFL-212ENST00000584655 COPS5Q92905 334 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 ST7Q9NRC1 585 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 RWDD2AQ9UIY3 292 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 LRRIQ4A6NIV6 560 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 GALNT17Q6IS24 598 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 ZBTB33Q86T24 672 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 NEK11Q8NG66 645 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 NDST4Q9H3R1 872 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
RFFL-212ENST00000584655 GCLMP48507 274 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 MB21D1Q8N884 522 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 PSMD1Q99460 953 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 CCSER1Q9C0I3 900 aa11.34□□□□□ -0.59
RFFL-212ENST00000584655 LRRC53A6NM62 1247 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 RGL2O15211 777 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 SNHG28P0DPA3 235 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 SSR1P43307 286 aaKnown RBP11.33□□□□□ -0.6
RFFL-212ENST00000584655 ARSHQ5FYA8 562 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 GSPT2Q8IYD1 628 aaKnown RBP11.33□□□□□ -0.6
RFFL-212ENST00000584655 LRRC71Q8N4P6 559 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 AGBL3Q8NEM8 1001 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 MAP7D2Q96T17 732 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 SH2D4AQ9H788 454 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 DYNC1I1O14576 645 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 PTPRAP18433 802 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 ZNF394Q53GI3 561 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 TEKT3Q9BXF9 490 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 MFAP3LO75121 409 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 FTCDO95954 541 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 ZNF18P17022 549 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
RFFL-212ENST00000584655 SPA17Q15506 151 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 TTI2Q6NXR4 508 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 GIMAP8Q8ND71 665 aaPredicted RBP11.33□□□□□ -0.6
RFFL-212ENST00000584655 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
RFFL-212ENST00000584655 PRRC2BQ5JSZ5 2229 aaKnown RBP11.33□□□□□ -0.6
RFFL-212ENST00000584655 CETN3O15182 167 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 HIP1RO75146 1068 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 EIF4A3P38919 411 aaKnown RBP11.32□□□□□ -0.6
RFFL-212ENST00000584655 PADI6Q6TGC4 694 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 SYTL5Q8TDW5 730 aaPredicted RBP11.32□□□□□ -0.6
RFFL-212ENST00000584655 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 LACRTQ9GZZ8 138 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 GFPT2O94808 682 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 MOCS3O95396 460 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 NR3C2P08235 984 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 UNC13DQ70J99 1090 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 SCFD1Q8WVM8 642 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 EHD4Q9H223 541 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 TOPORSQ9NS56 1045 aaPredicted RBP11.32□□□□□ -0.6
RFFL-212ENST00000584655 ABHD10Q9NUJ1 306 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 GPRC5DQ9NZD1 345 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
RFFL-212ENST00000584655 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 SLITRK3O94933 977 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 BACE1P56817 501 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 TMEM132BQ14DG7 1078 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 LY6KQ17RY6 165 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 CTAGE1Q96RT6 745 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 EFCC1Q9HA90 598 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 EPN1Q9Y6I3 576 aaPredicted RBP11.32□□□□□ -0.6
RFFL-212ENST00000584655 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 TNNT3P45378 269 aaPredicted RBP11.32□□□□□ -0.6
RFFL-212ENST00000584655 GYS2P54840 703 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 TGFB2P61812 414 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 TRIML1Q8N9V2 468 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 OR8K1Q8NGG5 319 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
RFFL-212ENST00000584655 ARMCX3Q9UH62 379 aaPredicted RBP11.32□□□□□ -0.6
RFFL-212ENST00000584655 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 BICDL2A1A5D9 508 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 LMNB1P20700 586 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 ETF1P62495 437 aaKnown RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 ITGB3BPQ13352 177 aaPredicted RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 ZNF397Q8NF99 534 aaPredicted RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 MYRIPQ8NFW9 859 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 TEPSINQ96N21 525 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 CBWD1Q9BRT8 395 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 RHOBTB3O94955 611 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 COL4A5P29400 1685 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 MRPS9P82933 396 aaKnown RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 SLFN12Q8IYM2 578 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 MYO3BQ8WXR4 1341 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 AK8Q96MA6 479 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 ROBO3Q96MS0 1386 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms