RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 MX1P20591 662 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 CTHP32929 405 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 HTRA4P83105 476 aaPredicted RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 MBTPS1Q14703 1052 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 PTPROQ16827 1216 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 CSPP1Q1MSJ5 1256 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 KIAA0753Q2KHM9 967 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 TRIM71Q2Q1W2 868 aaKnown RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 USH1GQ495M9 461 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 MCMDC2Q4G0Z9 681 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 GPATCH4Q5T3I0 446 aaKnown RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 MFSD6Q6ZSS7 791 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 DGKHQ86XP1 1220 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 MCF2L2Q86YR7 1114 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 DHX37Q8IY37 1157 aaKnown RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 DBF4BQ8NFT6 615 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 OTUD7AQ8TE49 926 aaPredicted RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 EVI5LQ96CN4 794 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 MRPL38Q96DV4 380 aaKnown RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 CDK15Q96Q40 435 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 UIMC1Q96RL1 719 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 RMDN3Q96TC7 470 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 C17orf80Q9BSJ5 609 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 COL20A1Q9P218 1284 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 TCF20Q9UGU0 1960 aaKnown RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 RSPH10B2B2RC85 870 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 H3BNC9 293 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 H3BQ06 376 aaPredicted RBP6.22□□□□□ -1.41
VAPA-207ENST00000583879 RNF225M0QZC1 329 aaPredicted RBP6.22□□□□□ -1.41
VAPA-207ENST00000583879 DCXO43602 365 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 F2P00734 622 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 NR3C2P08235 984 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 RSPH10BP0C881 870 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 HSPD1P10809 573 aaKnown RBP6.22□□□□□ -1.41
VAPA-207ENST00000583879 BMP2P12643 396 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 GSK3AP49840 483 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 ZNF200P98182 395 aaPredicted RBP6.22□□□□□ -1.41
VAPA-207ENST00000583879 NR5A1Q13285 461 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 EPC2Q52LR7 807 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 PLEKHG4Q58EX7 1191 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 ARHGEF16Q5VV41 709 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 KCNV1Q6PIU1 500 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 ADGRF4Q8IZF3 695 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 MYOCDQ8IZQ8 938 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 BANK1Q8NDB2 785 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 PPTC7Q8NI37 304 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 UBE2Q2Q8WVN8 375 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 WNT8BQ93098 351 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 TOP1MTQ969P6 601 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 ITPKCQ96DU7 683 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 PABPC5Q96DU9 382 aaKnown RBP6.22□□□□□ -1.41
VAPA-207ENST00000583879 SAMD11Q96NU1 681 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 KCNH6Q9H252 994 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 CPVLQ9H3G5 476 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 PRKAG3Q9UGI9 489 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 MRPL11Q9Y3B7 192 aaKnown RBP6.22□□□□□ -1.41
VAPA-207ENST00000583879 PCDHB15Q9Y5E8 787 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 MCM3APO60318 1980 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 ABCB11O95342 1321 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 EMSYQ7Z589 1322 aa6.22□□□□□ -1.41
VAPA-207ENST00000583879 PRRC2BQ5JSZ5 2229 aaKnown RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 RBAK-RBAKDNI3L0D1 243 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 NCK2O43639 380 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 TGFB3P10600 412 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 HOXD8P13378 290 aaPredicted RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 EIF2AK2P19525 551 aaKnown RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 THPOP40225 353 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 NT5C2P49902 561 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 MRE11P49959 708 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 HAND2P61296 217 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 NHLH1Q02575 133 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 GPM6BQ13491 265 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 COL19A1Q14993 1142 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 CDC37Q16543 378 aaPredicted RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 HSDL1Q3SXM5 330 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 CCDC178Q5BJE1 867 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 TCEAL5Q5H9L2 206 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 CELF3Q5SZQ8 465 aaKnown RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 MYSM1Q5VVJ2 828 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 SERINC5Q86VE9 423 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 VSIG10LQ86VR7 867 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 TICAM2Q86XR7 235 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 TMEM192Q8IY95 271 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 ANKS1AQ92625 1134 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 ESR2Q92731 530 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 FAM227BQ96M60 508 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 SPATA33Q96N06 139 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 ZKSCAN3Q9BRR0 538 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 C16orf70Q9BSU1 422 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 UPF3BQ9BZI7 483 aaKnown RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 KDM4CQ9H3R0 1056 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 RNF41Q9H4P4 317 aaPredicted RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 VAT1LQ9HCJ6 419 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 MAP3K20Q9NYL2 800 aaKnown RBP6.21□□□□□ -1.42
VAPA-207ENST00000583879 FAM50BQ9Y247 325 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 LRRC37A2A6NM11 1700 aa6.21□□□□□ -1.42
VAPA-207ENST00000583879 GBF1Q92538 1859 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms