RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 ICAM3P32942 547 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 DLX2Q07687 328 aaPredicted RBP10.11□□□□□ -0.79
NUP85-223ENST00000583877 SMAD4Q13485 552 aaKnown RBP10.11□□□□□ -0.79
NUP85-223ENST00000583877 NEDD9Q14511 834 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 UBAC1Q9BSL1 405 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 PLVAPQ9BX97 442 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 BCAS3Q9H6U6 928 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 CNNM2Q9H8M5 875 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 EHMT1Q9H9B1 1298 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 RC3H2Q9HBD1 1191 aaKnown RBP10.11□□□□□ -0.79
NUP85-223ENST00000583877 MAD2L2Q9UI95 211 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 MUTYHQ9UIF7 546 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 ZNF215Q9UL58 517 aaPredicted RBP10.11□□□□□ -0.79
NUP85-223ENST00000583877 FAM186AA6NE01 2351 aa10.11□□□□□ -0.79
NUP85-223ENST00000583877 PLXNA3P51805 1871 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 FRMPD4Q14CM0 1322 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 NRCAMQ92823 1304 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 PALM3A6NDB9 673 aaPredicted RBP10.1□□□□□ -0.79
NUP85-223ENST00000583877 SPATA31C2B4DYI2 1134 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 STXBP3O00186 592 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 TBX10O75333 385 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 CHRNA1P02708 482 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 MMP1P03956 469 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 MRPS9P82933 396 aaKnown RBP10.1□□□□□ -0.79
NUP85-223ENST00000583877 ARHGAP4P98171 946 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 HDAC1Q13547 482 aaPredicted RBP10.1□□□□□ -0.79
NUP85-223ENST00000583877 SEC23AQ15436 765 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 CLUL1Q15846 466 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 IMMTQ16891 758 aaKnown RBP10.1□□□□□ -0.79
NUP85-223ENST00000583877 CYFIP1Q7L576 1253 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 BMP8AQ7Z5Y6 402 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 FCHSD1Q86WN1 690 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 LMBR1Q8WVP7 490 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 EDAQ92838 391 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 ZNF689Q96CS4 500 aaPredicted RBP10.1□□□□□ -0.79
NUP85-223ENST00000583877 INPP4AQ96PE3 977 aaPredicted RBP10.1□□□□□ -0.79
NUP85-223ENST00000583877 GPR20Q99678 358 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 DSCC1Q9BVC3 393 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 CD207Q9UJ71 328 aa10.1□□□□□ -0.79
NUP85-223ENST00000583877 ENPP3O14638 875 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 FIBPO43427 364 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 EYA4O95677 639 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 GHRP10912 638 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 SEMA3FQ13275 785 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 ADAM15Q13444 863 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 BTG3Q14201 252 aaPredicted RBP10.09□□□□□ -0.79
NUP85-223ENST00000583877 PKN1Q16512 942 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 NAALADL2Q58DX5 795 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 TAF2Q6P1X5 1199 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 CWC27Q6UX04 472 aaKnown RBP10.09□□□□□ -0.79
NUP85-223ENST00000583877 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 HOMER1Q86YM7 354 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 P2RX5Q93086 422 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 PPP2R3CQ969Q6 453 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 PRRX2Q99811 253 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 SENP7Q9BQF6 1050 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 IGFLR1Q9H665 355 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 RIOX1Q9H6W3 641 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 PLAGL2Q9UPG8 496 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 DCHS1Q96JQ0 3298 aa10.09□□□□□ -0.79
NUP85-223ENST00000583877 PNMA6FA0A0J9YX94 578 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 HIP1O00291 1037 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 LINC01565O15544 149 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 DGKIO75912 1065 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 GTF2F1P35269 517 aaKnown RBP eCLIP10.08□□□□□ -0.8
NUP85-223ENST00000583877 PTPN5P54829 565 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 MGAT3Q09327 533 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 CAMK1Q14012 370 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 LPIN1Q14693 890 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 GRM4Q14833 912 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 UTP14CQ5TAP6 766 aaKnown RBP10.08□□□□□ -0.8
NUP85-223ENST00000583877 RUFY4Q6ZNE9 571 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 RSPH3Q86UC2 560 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 GIMAP8Q8ND71 665 aaPredicted RBP10.08□□□□□ -0.8
NUP85-223ENST00000583877 MSLNLQ96KJ4 702 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 PIGSQ96S52 555 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 LNPKQ9C0E8 428 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 OSBPL3Q9H4L5 887 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 ALG13Q9NP73 1137 aaKnown RBP10.08□□□□□ -0.8
NUP85-223ENST00000583877 DIAPH3Q9NSV4 1193 aa10.08□□□□□ -0.8
NUP85-223ENST00000583877 TMEM221A6NGB7 291 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 M0R296 226 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 CYTH3O43739 400 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 NDUFV1P49821 464 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 COASYQ13057 564 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 SLC35G1Q2M3R5 365 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 FBXO47Q5MNV8 452 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 PCNX4Q63HM2 1172 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 XRRA1Q6P2D8 792 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 TSHZ1Q6ZSZ6 1077 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 TRIM67Q6ZTA4 783 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 CYB5R4Q7L1T6 521 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 CMTR2Q8IYT2 770 aaKnown RBP10.07□□□□□ -0.8
NUP85-223ENST00000583877 EFHBQ8N7U6 833 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 SMRP1Q8NCR6 262 aa10.07□□□□□ -0.8
NUP85-223ENST00000583877 PRSS33Q8NF86 280 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms