RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 C11orf16Q9NQ32 467 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RWDD3Q9Y3V2 267 aa11.11□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CCDC69A6NI79 296 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NCK2O43639 380 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PRC1O43663 620 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PLEKHA8P1O95397 391 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CHRNA1P02708 482 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RB1P06400 928 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CALM1P0DP23 149 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CALM2P0DP24 149 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CALM3P0DP25 149 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ALADP13716 330 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 KCNA2P16389 499 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 NFKBIBQ15653 356 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GRIK4Q16099 956 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ADCK5Q3MIX3 580 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RUFY4Q6ZNE9 571 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GLG1Q92896 1179 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TMX3Q96JJ7 454 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TMEM87BQ96K49 555 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 C11orf84Q9BUA3 381 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 LMAN2LQ9H0V9 348 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SMARCAD1Q9H4L7 1026 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PSTPIP2Q9H939 334 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 TUBE1Q9UJT0 475 aa11.1□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 BRWD1Q9NSI6 2320 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 GSTTP1A0A1W2PQM5 241 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 C5orf67F2Z3F1 127 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SH2B2O14492 632 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ATP9AO75110 1047 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 ITGB5P18084 799 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MARK3P27448 753 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MCM5P33992 734 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 BMPR1AP36894 532 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MGAT3Q09327 533 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 MTMR1Q13613 665 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 LPIN1Q14693 890 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 COL19A1Q14993 1142 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 SRBD1Q8N5C6 995 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CLDND1Q9NY35 253 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PKD2L1Q9P0L9 805 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 PRKAG3Q9UGI9 489 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 UBIAD1Q9Y5Z9 338 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 CDY2AQ9Y6F7 541 aa11.09□□□□□ -0.63
CDK5RAP3-227ENST00000583352 RRN3P2A6NIE6 340 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PRR33A8MZF0 331 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ENPP3O14638 875 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MAFGO15525 162 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PSMA5P28066 241 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LIFRP42702 1097 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 IGBP1P78318 339 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MRPS6P82932 125 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 BTG3Q14201 252 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 UBE2SQ16763 222 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CSPP1Q1MSJ5 1256 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 FBXO47Q5MNV8 452 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RNF20Q5VTR2 975 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TSHZ1Q6ZSZ6 1077 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RUFY3Q7L099 469 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 DNAJB3Q8WWF6 145 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TNPO1Q92973 898 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RC3H2Q9HBD1 1191 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PCDHA6Q9UN73 950 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PCDHA8Q9Y5H6 950 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CHD7Q9P2D1 2997 aa11.08□□□□□ -0.64
CDK5RAP3-227ENST00000583352 M0QZ92 97 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 GRM6O15303 877 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 DCXO43602 365 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CPA1P15085 419 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RXRAP19793 462 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 COL9A3Q14050 684 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 IER5Q5VY09 327 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CLP1Q92989 425 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ZNF689Q96CS4 500 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 UIMC1Q96RL1 719 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PLVAPQ9BX97 442 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 FAM49AQ9H0Q0 323 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 AZI2Q9H6S1 392 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 JPH1Q9HDC5 661 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PDRG1Q9NUG6 133 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LIMCH1Q9UPQ0 1083 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SLC12A7Q9Y666 1083 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CYP46A1Q9Y6A2 500 aa11.07□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SQORQ9Y6N5 450 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms